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peptide-repo-core v0.6.0: peptide schema backfill + Yoast-integrated Drug/MedicalWebPage/FAQ (#19)

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Backfill psa_*->_pr_* meta (migration 0004 + PubChem fallback); enrich Drug node with {permalink}#drug @id + molecularFormula/Weight/alternateName; rewrite emitter into Yoast schema graph (MedicalWebPage retype + FAQPage, no duplicate nodes).

QA: APPROVE (independent) — qa-reviews/peptide-repo-core/2026-06-13-817690c1b6ec2118ddcf3b8cfe8bc5ea7f3933b3.md

Agent-Session: peptide-schema-backfill v0.6.0 merge
This commit is contained in:
peptiderepo
2026-06-13 13:09:56 +07:00
committed by GitHub
parent cc5d06b970
commit e9d97b51e2
18 changed files with 2004 additions and 119 deletions
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55
includes/cpt/class-pr-core-peptide-cpt.php
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@@ -68,7 +68,7 @@ class PR_Core_Peptide_CPT {
'aliases' => [
'type' => 'string',
'default' => '[]',
'sanitize' => [ __CLASS__, 'sanitize_json_array' ],
'sanitize' => [ PR_Core_Schema_Sanitizers::class, 'sanitize_json_array' ],
],
'molecular_formula' => [
'type' => 'string',
@@ -145,6 +145,28 @@ class PR_Core_Peptide_CPT {
'default' => 'current',
'sanitize' => [ PR_Core_Verification_Sanitizers::class, 'sanitize_status' ],
],
// Schema-input meta (v0.6.0): molecular data sourced from PSA psa_* keys via migration 0004.
'_pr_molecular_formula' => [
'type' => 'string',
'default' => '',
'sanitize' => [ PR_Core_Schema_Sanitizers::class, 'sanitize_molecular_formula' ],
],
'_pr_molecular_weight' => [
'type' => 'string',
'default' => '',
'sanitize' => [ PR_Core_Schema_Sanitizers::class, 'sanitize_molecular_weight_string' ],
],
'_pr_aliases' => [
'type' => 'string',
'default' => '[]',
'sanitize' => [ PR_Core_Schema_Sanitizers::class, 'sanitize_json_array' ],
],
// FAQ items (v0.6.0): [{question, answer}] JSON for FAQPage schema. Populated by CMO content sprint.
'_pr_faq_items' => [
'type' => 'string',
'default' => '[]',
'sanitize' => [ PR_Core_Schema_Sanitizers::class, 'sanitize_faq_items' ],
],
];
}
@@ -160,12 +182,7 @@ class PR_Core_Peptide_CPT {
}
/**
* Register the `peptide` custom post type.
*
* Guarded with `post_type_exists()`: if another plugin (historically PSA)
* has already registered the `peptide` post type, this call no-ops. This
* makes deploy order between PR Core and PSA irrelevant during the
* PSA v4.5.0 consolidation transition.
* Register the `peptide` CPT. Guarded with post_type_exists() so deploy order is irrelevant.
*
* Side effects: registers CPT with WordPress.
*
@@ -218,15 +235,7 @@ class PR_Core_Peptide_CPT {
}
/**
* Register the `peptide_category` taxonomy.
*
* Guarded with `taxonomy_exists()` for the same reason CPT registration
* is guarded. The 8 existing terms + term_relationships stay intact —
* they key on taxonomy name `peptide_category` in wp_term_taxonomy,
* which is exactly what we register here.
*
* v0.2.0: `pr_peptide_family` taxonomy removed — never populated, never
* surfaced in UI.
* Register the `peptide_category` taxonomy. Guarded with taxonomy_exists().
*
* Side effects: registers taxonomy with WordPress.
*
@@ -272,20 +281,6 @@ class PR_Core_Peptide_CPT {
}
}
/** Sanitize a JSON array string (e.g., aliases field). */
public static function sanitize_json_array( $value ): string {
if ( is_array( $value ) ) {
$value = wp_json_encode( array_map( 'sanitize_text_field', $value ) );
}
$decoded = json_decode( (string) $value, true );
if ( ! is_array( $decoded ) ) {
return '[]';
}
return wp_json_encode( array_values( array_map( 'sanitize_text_field', $decoded ) ) );
}
/** Sanitize evidence_strength to allowed enum values. */
public static function sanitize_evidence_strength( $value ): string {
$value = sanitize_text_field( (string) $value );