Commit Graph

6 Commits

Author SHA1 Message Date
peptiderepo
1ce471981b feat: PRAB article JSON-LD emitter + meta reader (v0.8.0)
- PR_Core_Jsonld_Article: meta-triggered emitter for PRAutoBlogger posts
  (trigger: _prab_schema_version=1 on post type). Yoast path retypes page
  node to MedicalWebPage (wpseo_schema_webpage_type priority 10) and enriches
  Article piece with citation[], about[]→Drug @id, lastReviewed, honest
  reviewedBy (wpseo_schema_graph priority 13). No-Yoast fallback emits
  standalone @graph. Posts without trigger meta are byte-unchanged.

- PR_Core_Prab_Meta_Reader: sanitises all _prab_* contract-v1 meta at read
  time. URLs validated (http/https), DOIs normalised to https://doi.org/ URI,
  JSON arrays per-element validated, WP user ID resolved. Malformed values
  degrade gracefully. Honest reviewedBy: Person ONLY when mode=human + valid
  user ID; else Organization. Never a fabricated person.

- Unit tests: JsonldArticleTest.php — 22 assertions covering is_triggered,
  review_mode, reviewed_by Person/Org decision tree, citation sanitization,
  DOI normalisation, about linkage, retype passthrough, enrich, no-new-nodes,
  editorial-system-never-person.

- bootstrap.php: WP_User stub + get_userdata reads pr_test_userdata global.
- ARCHITECTURE.md: updated JSON-LD class tree + PRAB emission section.
- CONVENTIONS.md: PRAB contract v2 extension guide added.
- CHANGELOG.md + version bump to v0.8.0.

Ratified contract: convo/prcore/decisions/2026-06-11-jsonld-contract-v1.md
File sizes: article.php=235L, meta-reader.php=265L (both < 300-line gate).
No duplicate Article/WebPage nodes. uninstall.php unaffected (_prab_* unowned).

Agent-Session: prcore-jsonld-article-20260622
2026-06-23 04:23:21 +00:00
peptiderepo
e9d97b51e2 peptide-repo-core v0.6.0: peptide schema backfill + Yoast-integrated Drug/MedicalWebPage/FAQ (#19)
Backfill psa_*->_pr_* meta (migration 0004 + PubChem fallback); enrich Drug node with {permalink}#drug @id + molecularFormula/Weight/alternateName; rewrite emitter into Yoast schema graph (MedicalWebPage retype + FAQPage, no duplicate nodes).

QA: APPROVE (independent) — qa-reviews/peptide-repo-core/2026-06-13-817690c1b6ec2118ddcf3b8cfe8bc5ea7f3933b3.md

Agent-Session: peptide-schema-backfill v0.6.0 merge
2026-06-13 13:09:56 +07:00
peptiderepo
708204c3b6 PR Core v0.5.0: Add Repo Daily CPT, taxonomy, and metaboxes
- Register repo_daily CPT at /daily/[slug]/ for editorial publications
- Register repo_daily_category taxonomy with 4 seeded terms
- Add Repo Daily metabox for author byline and clinical review flag
- Bulk-migrate _repo_daily_author on autoblogged posts (psa_source)
- Update ARCHITECTURE.md with content-type table and scanner scope
- Update CONVENTIONS.md with repo_daily meta field extension pattern
- Bump version to 0.5.0, add CHANGELOG entry

Closes v0.5.0 scope.
2026-04-27 15:33:28 +00:00
peptiderepo
f086b89e2d feat(cpt): consolidate peptide CPT with PSA; drop pr_peptide (v0.2.0) (#1)
Consolidates the `peptide` CPT under PR Core ownership, dropping the `pr_peptide` slug-collision that was 404ing all 89 peptide detail pages.

- POST_TYPE: pr_peptide -> peptide
- TAX_CATEGORY: pr_peptide_category -> peptide_category
- TAX_FAMILY + pr_peptide_family taxonomy removed
- Defensive post_type_exists/taxonomy_exists guards on both registrations
- Args harmonized as superset of PSA + prior PR Core (adds thumbnail support)
- Activation hook + init:999 version-change flush handler
- Uninstall scoped to _pr_core_authored flag (PSA-authored posts survive)
- Plugin version 0.1.1 -> 0.2.0, CHANGELOG in same commit
- ARCHITECTURE.md + CONVENTIONS.md updated with CPT ownership rule

QA gate verdict: PASS (qa-reviews/peptide-repo-core/2026-04-22-874f93b.md)
Sibling release: peptiderepo/peptide-search-ai#15 (PSA v4.5.0)

Known follow-up: manage_peptide_content capability is not granted to any role as of v0.2.0. No current UI/theme reads or writes PR Core-defined meta keys, so no regression. Follow-up thread to decide role assignment.
2026-04-22 16:44:04 +07:00
peptiderepo
c9361b0283 fix(ci): restructure CI for PHP 8.1+ and proper PHPCS setup
- Drop PHP 8.0 from matrix — DTOs use readonly properties (8.1+)
- Add composer.json with PHPCS/WPCS as dev dependencies
- Add phpcs.xml.dist for WordPress coding standard config
- Use dealerdirect/phpcodesniffer-composer-installer for auto path setup
- Separate lint jobs: PHP syntax (8.1/8.2/8.3) + PHPCS + file-size
- Update Requires PHP header to 8.1
- Update ARCHITECTURE.md file tree

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-17 07:43:01 +07:00
peptiderepo
808b2509d8 feat: initial peptide-repo-core plugin (v0.1.0) — canonical schema sprint
Implements ADR-0002: canonical peptide schema as shared data layer for
the peptiderepo.com ecosystem. All Tier 1 tools (Reconstitution Calculator,
Dosage Reference, Legal Status Tracker, PSA enhancements) build on this.

Includes:
- pr_peptide CPT with REST, taxonomies, 11 meta fields
- 3 custom tables: pr_dosing_rows, pr_legal_cells, pr_ai_candidate_queue
- Sequential migration runner with schema versioning
- 4 typed DTOs and 4 repository classes (full CRUD)
- REST API (pr-core/v1): 6 endpoints (read public, write auth-gated)
- Admin UI: 3 meta boxes, custom columns, AI candidate queue page
- Shared disclaimer component (shortcode + static API)
- JSON-LD Drug schema emission on single peptide pages
- Seed data fixture (3 peptides, 10 dosing rows, 5 legal cells)
- Full teardown in uninstall.php
- CI: PHP lint 8.0-8.2, PHPCS WordPress, 300-line check

All 22 PHP files under 300 lines. Highest: peptide-cpt at 265.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-17 07:36:12 +07:00