302 lines
9.6 KiB
PHP
302 lines
9.6 KiB
PHP
<?php
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declare(strict_types=1);
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/**
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* Registers the peptide custom post type and associated taxonomies.
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*
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* What: Defines the peptide CPT with REST support, archive, and monograph meta fields.
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* Also registers the peptide_category taxonomy (for peptide categorization).
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* Who calls it: PR_Core::init() on plugins_loaded.
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* Dependencies: None.
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*
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* Ownership: As of v0.2.0, PR Core is the canonical owner of the `peptide` CPT
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* and `peptide_category` taxonomy (previously registered by Peptide Search AI
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* pre-schema-sprint; PSA v4.5.0 drops its registrations in favor of this one).
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* Registration is guarded by `post_type_exists()` / `taxonomy_exists()` so
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* deploy order between the two plugins does not matter — whichever runs first
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* wins, the other no-ops.
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*
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* As of v0.3.0, `peptide_topic` taxonomy is registered in a separate class
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* (PR_Core_Topic_Taxonomy) for linking blog posts to peptides via a shared
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* topic slug (e.g., 'bpc-157'). This enables the Related Articles feature.
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*
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* @see ARCHITECTURE.md — CPT specification and post-meta field definitions.
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* @see CONVENTIONS.md — CPT ownership rule (no plugin registers a CPT another plugin owns).
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*/
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class PR_Core_Peptide_CPT {
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/** @var string Post type slug (owned by PR Core since v0.2.0; PSA previously registered this). */
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public const POST_TYPE = 'peptide';
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/** @var string Taxonomy: category (e.g., GLP-1 agonist). */
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public const TAX_CATEGORY = 'peptide_category';
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/** @var string Capability required for editing peptide data. */
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public const CAPABILITY = 'manage_peptide_content';
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/**
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* Evidence strength enum values, ordered weakest to strongest.
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*
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* @var string[]
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*/
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public const EVIDENCE_STRENGTHS = [
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'preclinical',
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'case-series',
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'observational',
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'rct-small',
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'rct-large',
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'meta-analysis',
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];
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/**
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* Editorial review status enum values.
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*
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* @var string[]
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*/
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public const REVIEW_STATUSES = [
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'draft',
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'in-review',
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'published',
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'retired',
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];
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/**
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* Post-meta field definitions (1:1 with peptide).
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* Key => [ 'type', 'default', 'sanitize_callback', 'show_in_rest' ].
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*
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* @return array<string, array<string, mixed>>
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*/
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public static function get_meta_fields(): array {
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return [
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'display_name' => [
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'type' => 'string',
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'default' => '',
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'sanitize' => 'sanitize_text_field',
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],
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'aliases' => [
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'type' => 'string',
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'default' => '[]',
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'sanitize' => [ __CLASS__, 'sanitize_json_array' ],
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],
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'molecular_formula' => [
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'type' => 'string',
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'default' => '',
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'sanitize' => 'sanitize_text_field',
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],
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'molecular_weight' => [
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'type' => 'number',
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'default' => 0,
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'sanitize' => 'floatval',
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],
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'cas_number' => [
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'type' => 'string',
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'default' => '',
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'sanitize' => 'sanitize_text_field',
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],
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'drugbank_id' => [
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'type' => 'string',
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'default' => '',
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'sanitize' => 'sanitize_text_field',
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],
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'chembl_id' => [
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'type' => 'string',
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'default' => '',
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'sanitize' => 'sanitize_text_field',
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],
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'evidence_strength' => [
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'type' => 'string',
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'default' => 'preclinical',
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'sanitize' => [ __CLASS__, 'sanitize_evidence_strength' ],
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],
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'editorial_review_status' => [
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'type' => 'string',
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'default' => 'draft',
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'sanitize' => [ __CLASS__, 'sanitize_review_status' ],
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],
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'last_editorial_review_at' => [
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'type' => 'string',
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'default' => '',
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'sanitize' => 'sanitize_text_field',
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],
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'medical_editor_id' => [
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'type' => 'integer',
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'default' => 0,
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'sanitize' => 'absint',
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],
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];
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}
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/**
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* Register WordPress hooks for CPT and taxonomy registration.
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*
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* @return void
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*/
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public function register_hooks(): void {
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add_action( 'init', [ __CLASS__, 'register_peptide_post_type' ] );
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add_action( 'init', [ __CLASS__, 'register_taxonomies' ] );
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add_action( 'init', [ __CLASS__, 'register_meta_fields' ] );
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}
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/**
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* Register the `peptide` custom post type.
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*
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* Guarded with `post_type_exists()`: if another plugin (historically PSA)
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* has already registered the `peptide` post type, this call no-ops. This
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* makes deploy order between PR Core and PSA irrelevant during the
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* PSA v4.5.0 consolidation transition.
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*
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* Side effects: registers CPT with WordPress.
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*
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* @return void
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*/
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public static function register_peptide_post_type(): void {
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if ( post_type_exists( self::POST_TYPE ) ) {
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return;
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}
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$labels = [
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'name' => __( 'Peptides', 'peptide-repo-core' ),
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'singular_name' => __( 'Peptide', 'peptide-repo-core' ),
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'add_new_item' => __( 'Add New Peptide', 'peptide-repo-core' ),
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'edit_item' => __( 'Edit Peptide', 'peptide-repo-core' ),
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'new_item' => __( 'New Peptide', 'peptide-repo-core' ),
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'view_item' => __( 'View Peptide', 'peptide-repo-core' ),
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'search_items' => __( 'Search Peptides', 'peptide-repo-core' ),
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'not_found' => __( 'No peptides found', 'peptide-repo-core' ),
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'not_found_in_trash' => __( 'No peptides found in trash', 'peptide-repo-core' ),
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'all_items' => __( 'All Peptides', 'peptide-repo-core' ),
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'menu_name' => __( 'Peptides', 'peptide-repo-core' ),
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];
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/*
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* Args are a harmonized superset of PR Core's prior `pr_peptide` args
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* and PSA's `peptide` args, so the 89 existing posts (authored under
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* PSA's registration) keep every capability they relied on:
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* - supports: union of both — thumbnail comes from PSA, revisions +
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* custom-fields come from PR Core.
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* - capability_type + map_meta_cap: preserve PSA's per-role perms.
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* - rewrite slug `peptides`: unchanged from both plugins, so
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* /peptides/%postname%/ URLs keep working and theme templates
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* single-peptide.php / archive-peptide.php continue to match.
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*/
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$args = [
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'labels' => $labels,
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'public' => true,
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'publicly_queryable' => true,
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'show_ui' => true,
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'show_in_menu' => true,
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'show_in_nav_menus' => true,
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'show_in_rest' => true,
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'rest_base' => 'peptides',
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'rest_namespace' => 'pr-core/v1',
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'menu_position' => 25,
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'menu_icon' => 'dashicons-database',
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'capability_type' => 'post',
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'map_meta_cap' => true,
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'hierarchical' => false,
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'has_archive' => true,
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'rewrite' => [ 'slug' => 'peptides', 'with_front' => false ],
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'supports' => [ 'title', 'editor', 'thumbnail', 'excerpt', 'revisions', 'custom-fields' ],
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];
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register_post_type( self::POST_TYPE, $args );
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}
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/**
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* Register the `peptide_category` taxonomy.
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*
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* Guarded with `taxonomy_exists()` for the same reason CPT registration
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* is guarded. The 8 existing category terms + term_relationships stay intact —
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* they key on taxonomy name `peptide_category` in wp_term_taxonomy,
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* which is exactly what we register here.
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*
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* v0.2.0: `pr_peptide_family` taxonomy removed — never populated, never
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* surfaced in UI.
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*
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* v0.3.0: `peptide_topic` taxonomy moved to PR_Core_Topic_Taxonomy class.
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*
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* Side effects: registers taxonomy with WordPress.
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*
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* @return void
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*/
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public static function register_taxonomies(): void {
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// Register peptide_category taxonomy.
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if ( ! taxonomy_exists( self::TAX_CATEGORY ) ) {
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register_taxonomy( self::TAX_CATEGORY, self::POST_TYPE, [
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'labels' => [
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'name' => __( 'Peptide Categories', 'peptide-repo-core' ),
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'singular_name' => __( 'Peptide Category', 'peptide-repo-core' ),
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],
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'public' => true,
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'publicly_queryable' => true,
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'show_in_rest' => true,
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'show_ui' => true,
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'show_admin_column' => true,
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'hierarchical' => true,
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'rewrite' => [ 'slug' => 'peptide-category', 'with_front' => false ],
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] );
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}
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}
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/**
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* Register post-meta fields. Auth gated on manage_peptide_content.
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*
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* @return void
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*/
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public static function register_meta_fields(): void {
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foreach ( self::get_meta_fields() as $key => $config ) {
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register_post_meta( self::POST_TYPE, $key, [
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'type' => $config['type'],
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'single' => true,
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'default' => $config['default'],
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'show_in_rest' => true,
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'sanitize_callback' => $config['sanitize'],
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'auth_callback' => static function () {
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return current_user_can( self::CAPABILITY );
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},
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] );
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}
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}
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/**
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* Sanitize a JSON array string (e.g., aliases field).
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*
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* @param mixed $value Raw input.
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* @return string Valid JSON array string.
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*/
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public static function sanitize_json_array( $value ): string {
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if ( is_array( $value ) ) {
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$value = wp_json_encode( array_map( 'sanitize_text_field', $value ) );
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}
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$decoded = json_decode( (string) $value, true );
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if ( ! is_array( $decoded ) ) {
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return '[]';
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}
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return wp_json_encode( array_values( array_map( 'sanitize_text_field', $decoded ) ) );
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}
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/**
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* Sanitize evidence_strength to allowed enum values.
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*
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* @param mixed $value Raw input.
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* @return string Valid enum value.
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*/
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public static function sanitize_evidence_strength( $value ): string {
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$value = sanitize_text_field( (string) $value );
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return in_array( $value, self::EVIDENCE_STRENGTHS, true ) ? $value : 'preclinical';
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}
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/**
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* Sanitize editorial_review_status to allowed enum values.
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*
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* @param mixed $value Raw input.
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* @return string Valid enum value.
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*/
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public static function sanitize_review_status( $value ): string {
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$value = sanitize_text_field( (string) $value );
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return in_array( $value, self::REVIEW_STATUSES, true ) ? $value : 'draft';
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}
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}
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