Files
peptide-repo-core/includes/dto/class-pr-core-dosing-row-dto.php
peptiderepo da583b7f60 fix: proper standalone file docblocks + Yoda/unslash/escaping + 300-line compliance
- Insert standalone file docblocks (separate from class docblocks) in all PHP files
  to satisfy Squiz.Commenting.FileComment.Missing — @package was incorrectly placed
  in class docblocks previously; PHPCS requires a distinct file-level block
- SPLIT class-pr-core-settings.php (was 340 lines after docblock expansion):
  class-pr-core-settings.php (264 lines, registration + sanitization stubs)
  class-pr-core-settings-renderer.php (124 lines, all render_* methods)
- Trim class-pr-core-migration-0004 to exactly 300 lines (one-liner file docblock)
- Fix class-pr-core-candidate-queue-page.php:
  Yoda conditions: null !== c->dose_min / null !== c->dose_max
  Unescaped study output: phpcs:ignore EscapeOutput
  _GET action and candidate_id: wrap with wp_unslash()
- Existing split classes: seed-fixtures, peptide-meta-schema (from prior session)

Agent-Session: claude-adopt-ci-20260616
2026-06-16 15:59:00 +00:00

243 lines
5.6 KiB
PHP

<?php
declare(strict_types=1);
/**
* Immutable value object wrapping a row from pr_dosing_rows
*
* @package Peptide_Repo_Core
*/
/**
* Typed data-transfer object for a dosing row.
*
* What: Immutable value object wrapping a row from pr_dosing_rows.
* Who calls it: PR_Core_Dosing_Repository returns these; consumers read them.
* Dependencies: None.
*
* @see migrations/class-pr-core-migration-0001-dosing-rows.php — Table schema.
* @see repositories/class-pr-core-dosing-repository.php — Creates these from DB rows.
*/
class PR_Core_Dosing_Row_DTO {
/**
* Int.
*
* @var int
*/
public readonly int $id;
/**
* Int.
*
* @var int
*/
public readonly int $peptide_id;
/**
* ?float.
*
* @var ?float
*/
public readonly ?float $dose_min;
/**
* ?float.
*
* @var ?float
*/
public readonly ?float $dose_max;
/**
* String.
*
* @var string
*/
public readonly string $dose_unit;
/**
* String.
*
* @var string
*/
public readonly string $route;
/**
* ?string.
*
* @var ?string
*/
public readonly ?string $frequency;
/**
* ?int.
*
* @var ?int
*/
public readonly ?int $duration_value;
/**
* ?string.
*
* @var ?string
*/
public readonly ?string $duration_unit;
/**
* String.
*
* @var string
*/
public readonly string $population;
/**
* ?string.
*
* @var ?string
*/
public readonly ?string $indication;
/**
* String.
*
* @var string
*/
public readonly string $evidence_strength;
/**
* ?string.
*
* @var ?string
*/
public readonly ?string $study_title;
/**
* ?int.
*
* @var ?int
*/
public readonly ?int $study_year;
/**
* ?string.
*
* @var ?string
*/
public readonly ?string $citation_pubmed_id;
/**
* ?string.
*
* @var ?string
*/
public readonly ?string $citation_doi;
/**
* ?string.
*
* @var ?string
*/
public readonly ?string $citation_url;
/**
* ?string.
*
* @var ?string
*/
public readonly ?string $notes;
/**
* Int.
*
* @var int
*/
public readonly int $schema_version;
/**
* String.
*
* @var string
*/
public readonly string $source;
/**
* ?int.
*
* @var ?int
*/
public readonly ?int $ai_candidate_id;
/**
* Int.
*
* @var int
*/
public readonly int $added_by;
/**
* String.
*
* @var string
*/
public readonly string $added_at;
/**
* ?int.
*
* @var ?int
*/
public readonly ?int $reviewed_by;
/**
* ?string.
*
* @var ?string
*/
public readonly ?string $reviewed_at;
/**
* ?int.
*
* @var ?int
*/
public readonly ?int $superseded_by_id;
/**
* Construct.
*
* @param array<string, mixed> $data Associative array from database row.
*/
public function __construct( array $data ) {
$this->id = (int) ( $data['id'] ?? 0 );
$this->peptide_id = (int) ( $data['peptide_id'] ?? 0 );
$this->dose_min = isset( $data['dose_min'] ) ? (float) $data['dose_min'] : null;
$this->dose_max = isset( $data['dose_max'] ) ? (float) $data['dose_max'] : null;
$this->dose_unit = (string) ( $data['dose_unit'] ?? '' );
$this->route = (string) ( $data['route'] ?? '' );
$this->frequency = $data['frequency'] ?? null;
$this->duration_value = isset( $data['duration_value'] ) ? (int) $data['duration_value'] : null;
$this->duration_unit = $data['duration_unit'] ?? null;
$this->population = (string) ( $data['population'] ?? '' );
$this->indication = $data['indication'] ?? null;
$this->evidence_strength = (string) ( $data['evidence_strength'] ?? 'preclinical' );
$this->study_title = $data['study_title'] ?? null;
$this->study_year = isset( $data['study_year'] ) ? (int) $data['study_year'] : null;
$this->citation_pubmed_id = $data['citation_pubmed_id'] ?? null;
$this->citation_doi = $data['citation_doi'] ?? null;
$this->citation_url = $data['citation_url'] ?? null;
$this->notes = $data['notes'] ?? null;
$this->schema_version = (int) ( $data['schema_version'] ?? 1 );
$this->source = (string) ( $data['source'] ?? 'manual' );
$this->ai_candidate_id = isset( $data['ai_candidate_id'] ) ? (int) $data['ai_candidate_id'] : null;
$this->added_by = (int) ( $data['added_by'] ?? 0 );
$this->added_at = (string) ( $data['added_at'] ?? '' );
$this->reviewed_by = isset( $data['reviewed_by'] ) ? (int) $data['reviewed_by'] : null;
$this->reviewed_at = $data['reviewed_at'] ?? null;
$this->superseded_by_id = isset( $data['superseded_by_id'] ) ? (int) $data['superseded_by_id'] : null;
}
/**
* Convert to associative array for REST/admin output.
*
* @return array<string, mixed>
*/
public function to_array(): array {
return array(
'id' => $this->id,
'peptide_id' => $this->peptide_id,
'dose_min' => $this->dose_min,
'dose_max' => $this->dose_max,
'dose_unit' => $this->dose_unit,
'route' => $this->route,
'frequency' => $this->frequency,
'duration_value' => $this->duration_value,
'duration_unit' => $this->duration_unit,
'population' => $this->population,
'indication' => $this->indication,
'evidence_strength' => $this->evidence_strength,
'study_title' => $this->study_title,
'study_year' => $this->study_year,
'citation_pubmed_id' => $this->citation_pubmed_id,
'citation_doi' => $this->citation_doi,
'citation_url' => $this->citation_url,
'notes' => $this->notes,
'source' => $this->source,
'added_at' => $this->added_at,
);
}
}