Deploy 868d31c from main

2026-04-22 10:14:27 +00:00
commit e62b51a764
28 changed files with 6032 additions and 0 deletions
--- a/includes/class-psa-directory.php
+++ b/includes/class-psa-directory.php
@@ -0,0 +1,114 @@
+<?php
+/**
+ * Browsable peptide directory — shortcode rendering and hook registration.
+ *
+ * What: Provides the [peptide_directory] shortcode and delegates REST to PSA_Directory_API.
+ * Who calls it: WordPress shortcode parser, main plugin file via PSA_Directory::init().
+ * Dependencies: PSA_Directory_API (REST endpoint), frontend JS/CSS.
+ *
+ * @package PeptideSearchAI
+ * @since   4.0.0
+ * @see     includes/class-psa-directory-api.php — REST endpoint and compound formatting.
+ * @see     assets/js/psa-directory.js            — Frontend grid, filter, modal logic.
+ * @see     assets/css/psa-directory.css           — Directory-specific styles.
+ */
+declare( strict_types=1 );
+
+if ( ! defined( 'ABSPATH' ) ) {
+	exit;
+}
+
+class PSA_Directory {
+
+	/** Cards per page for directory pagination. */
+	const PER_PAGE_DEFAULT = 12;
+	const PER_PAGE_MAX     = 100;
+
+	/** Register hooks. */
+	public static function init(): void {
+		add_shortcode( 'peptide_directory', array( __CLASS__, 'render_shortcode' ) );
+		add_action( 'rest_api_init', array( 'PSA_Directory_API', 'register_rest_routes' ) );
+	}
+
+	/**
+	 * Render the [peptide_directory] shortcode.
+	 * Outputs a container div populated by frontend JS via REST.
+	 *
+	 * @param array $atts Shortcode attributes (reserved for future use).
+	 * @return string HTML output.
+	 */
+	public static function render_shortcode( $atts ): string {
+		$terms = get_terms( array(
+			'taxonomy'   => 'peptide_category',
+			'hide_empty' => false,
+			'orderby'    => 'name',
+			'order'      => 'ASC',
+		) );
+
+		$categories = array();
+		if ( ! is_wp_error( $terms ) ) {
+			foreach ( $terms as $term ) {
+				$categories[] = array( 'slug' => $term->slug, 'name' => $term->name );
+			}
+		}
+
+		wp_localize_script( 'psa-directory', 'psaDirectory', array(
+			'restUrl'    => esc_url_raw( rest_url( 'peptide-search-ai/v1/compounds' ) ),
+			'nonce'      => wp_create_nonce( 'wp_rest' ),
+			'categories' => $categories,
+			'perPage'    => self::PER_PAGE_DEFAULT,
+			'i18n'       => array(
+				'title'            => __( 'Peptide Directory', 'peptide-search-ai' ),
+				'subtitle'         => __( 'Browse reagents with detailed research parameters.', 'peptide-search-ai' ),
+				'searchPlaceholder' => __( 'Search peptides...', 'peptide-search-ai' ),
+				'showAll'          => __( 'Show All', 'peptide-search-ai' ),
+				'loadMore'         => __( 'Load More', 'peptide-search-ai' ),
+				'loading'          => __( 'Loading...', 'peptide-search-ai' ),
+				'noResults'        => __( 'No peptides found matching your criteria.', 'peptide-search-ai' ),
+				'viewDetails'      => __( 'View Research Details', 'peptide-search-ai' ),
+				'viewFullPage'     => __( 'View Full Page', 'peptide-search-ai' ),
+				'close'            => __( 'Close', 'peptide-search-ai' ),
+				'halfLife'         => __( 'Half-Life', 'peptide-search-ai' ),
+				'stability'        => __( 'Stability', 'peptide-search-ai' ),
+				'solubility'       => __( 'Solubility', 'peptide-search-ai' ),
+				'vialSize'         => __( 'Vial Size', 'peptide-search-ai' ),
+				'storageLyo'       => __( 'Storage (Lyophilized)', 'peptide-search-ai' ),
+				'storageRecon'     => __( 'Storage (Reconstituted)', 'peptide-search-ai' ),
+				'molecularWeight'  => __( 'Molecular Weight', 'peptide-search-ai' ),
+				'formula'          => __( 'Formula', 'peptide-search-ai' ),
+				'typicalDose'      => __( 'Typical Dose', 'peptide-search-ai' ),
+				'cycleParams'      => __( 'Cycle Parameters', 'peptide-search-ai' ),
+				'sequence'         => __( 'Sequence', 'peptide-search-ai' ),
+				'singleReagents'   => __( 'Single Reagents', 'peptide-search-ai' ),
+				'protocolModels'   => __( 'Protocol Models', 'peptide-search-ai' ),
+				'comingSoon'       => __( 'Coming Soon', 'peptide-search-ai' ),
+				'researchParams'   => __( 'Research Parameters', 'peptide-search-ai' ),
+				'communityObs'     => __( 'Community Observations', 'peptide-search-ai' ),
+				'pubchemLink'      => __( 'View on PubChem', 'peptide-search-ai' ),
+				'copySequence'     => __( 'Copy', 'peptide-search-ai' ),
+				'copied'           => __( 'Copied!', 'peptide-search-ai' ),
+			),
+		) );
+
+		ob_start();
+		?>
+		<div id="psa-directory-root" class="psa-dir-wrap" aria-label="<?php esc_attr_e( 'Peptide Directory', 'peptide-search-ai' ); ?>">
+			<noscript>
+				<p><?php esc_html_e( 'Please enable JavaScript to browse the peptide directory.', 'peptide-search-ai' ); ?></p>
+			</noscript>
+		</div>
+		<?php
+		return ob_get_clean();
+	}
+
+	// ── Backward-compatible proxies (REST moved to PSA_Directory_API) ───
+
+	/** @see PSA_Directory_API::register_rest_routes() */
+	public static function register_rest_routes(): void { PSA_Directory_API::register_rest_routes(); }
+
+	/** @see PSA_Directory_API::rest_compounds() */
+	public static function rest_compounds( $request ) { return PSA_Directory_API::rest_compounds( $request ); }
+
+	/** @see PSA_Directory_API::format_compound() */
+	public static function format_compound( $post, string $fields = 'full' ): array { return PSA_Directory_API::format_compound( $post, $fields ); }
+}