Adopt reusable CI standard + PHPUnit conversion (#22)
Squash-merge of PR #22: adopt shared reusable CI workflow, convert PHPUnit to stubs, update branch-protection contexts.
QA-approved at 05d8094a1d. All required CI checks green.
Agent-Session: 2026-06-17-prcore-ci-deploy
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@@ -27,7 +27,7 @@ declare(strict_types=1);
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// Bootstrap the lightweight WP stubs.
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require_once __DIR__ . '/../bootstrap.php';
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// ── Additional stubs needed for migration 0004 ──────────────────────────
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// ── Additional stubs needed for migration 0004 ──────────────────────────.
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if ( ! defined( 'PR_CORE_TARGET_SCHEMA_VERSION' ) ) {
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define( 'PR_CORE_TARGET_SCHEMA_VERSION', 4 );
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@@ -85,7 +85,7 @@ require_once PR_CORE_PLUGIN_DIR . 'includes/migrations/class-pr-core-pubchem-cli
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// Load migration class under test.
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require_once PR_CORE_PLUGIN_DIR . 'includes/migrations/class-pr-core-migration-0004-backfill-peptide-meta.php';
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// ── Expose private methods via reflection ────────────────────────────────
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// ── Expose private methods via reflection ────────────────────────────────.
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/**
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* Call a private/protected method on an object via reflection.
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@@ -105,7 +105,7 @@ $migration = new PR_Core_Migration_0004_Backfill_Peptide_Meta();
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echo "== PR_Core_Migration_0004 unit tests ==\n\n";
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// ── parse_weight() ───────────────────────────────────────────────────────
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// ── parse_weight() ───────────────────────────────────────────────────────.
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echo "parse_weight():\n";
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@@ -145,7 +145,7 @@ pr_assert_equals(
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'strips whitespace and lowercase "da"'
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);
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// ── parse_aliases_string() ───────────────────────────────────────────────
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// ── parse_aliases_string() ───────────────────────────────────────────────.
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echo "\nparse_aliases_string():\n";
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@@ -167,8 +167,8 @@ pr_assert_equals( '[]', $whitespace_result, 'whitespace-only segments dropped, r
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$single = json_decode( $migration->parse_aliases_string( 'Only One' ), true );
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pr_assert_equals( 1, count( $single ), 'single alias produces array of 1' );
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// ── sanitize_formula() ───────────────────────────────────────────────────
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// Five required cases (Option B — validate, don't allowlist):
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// ── sanitize_formula() ───────────────────────────────────────────────────.
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// Five required cases (Option B — validate, don't allowlist):.
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// 1. Valid formula unchanged.
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// 2. Parenthesised formula preserved.
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// 3. Newline-injected payload — "injection" stripped, formula kept.
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@@ -219,7 +219,7 @@ pr_assert_equals(
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'whitespace-only returns empty string'
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);
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// ── Idempotency: skips when all three PR Core keys populated ─────────────
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// ── Idempotency: skips when all three PR Core keys populated ─────────────.
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echo "\nIdempotency (all _pr_* keys populated):\n";
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@@ -235,7 +235,7 @@ $result = call_private( $migration, 'backfill_post', [ 1 ] );
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pr_assert_equals( 'skipped', $result, 'returns "skipped" when all three keys non-empty' );
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pr_assert( empty( $GLOBALS['pr_test_updated_meta'] ), 'no update_post_meta calls when skipped' );
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// ── PSA source path ──────────────────────────────────────────────────────
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// ── PSA source path ──────────────────────────────────────────────────────.
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echo "\nPSA source path:\n";
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@@ -277,7 +277,7 @@ pr_assert( $formula_written, 'molecular formula meta was written' );
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pr_assert( $weight_written, 'molecular weight meta was written' );
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pr_assert( $aliases_written, 'aliases meta was written' );
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// ── Partial re-run: existing values preserved ────────────────────────────
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// ── Partial re-run: existing values preserved ────────────────────────────.
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echo "\nIdempotency: only some keys populated (partial re-run):\n";
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@@ -297,7 +297,7 @@ $GLOBALS['pr_test_posts'][3] = (object) [ 'post_title' => 'BPC-157', 'ID' => 3 ]
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$result = call_private( $migration, 'backfill_post', [ 3 ] );
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pr_assert_equals( 'copied_psa', $result, 'runs PSA copy even when only some keys populated' );
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// ── PubChem skip path: no PSA data, no network ──────────────────────────
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// ── PubChem skip path: no PSA data, no network ──────────────────────────.
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echo "\nPubChem skip path (no PSA data, no network in unit tests):\n";
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@@ -317,6 +317,6 @@ $result = call_private( $mock_migration, 'backfill_post', [ 10 ] );
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pr_assert_equals( 'pubchem_skip', $result, 'returns "pubchem_skip" when PubChem network fails' );
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pr_assert( empty( $GLOBALS['pr_test_updated_meta'] ), 'no meta written on pubchem_skip' );
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// ── Summary ──────────────────────────────────────────────────────────────
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// ── Summary ──────────────────────────────────────────────────────────────.
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exit( pr_test_summary() );
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