Commit Graph

24 Commits

Author SHA1 Message Date
peptiderepo
f591d5b01d fix: resolve remaining PHPCS errors — array formatting and closing brace
Fix multi-item associative array on single line in class-psa-admin.php
(line 273) and remove blank line before closing class brace in
class-psa-ai-generator.php (line 540).

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-13 21:40:06 +07:00
peptiderepo
3bbf927510 fix: resolve PHPCS errors and PHPUnit test failures for CI
Move declare(strict_types=1) after file-level docblock in all 12 class
files to satisfy WordPress Coding Standards docblock placement rule.
Fix multi-line function call formatting in class-psa-admin.php. Align
array double arrows and equals signs. Fix escaped backticks in
AIGeneratorTest heredoc that broke markdown fence stripping tests.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-13 21:38:04 +07:00
peptiderepo
ed65b6ab90 feat: add browsable peptide directory with category filtering, REST API, and extended meta fields (v4.3.0)
Adds [peptide_directory] shortcode with card grid, category taxonomy (8 terms),
search, pagination, detail modal, and /v1/compounds REST endpoint. Includes 9
new meta fields (half-life, stability, solubility, etc.), admin data tools for
migration/re-enrichment, integration hooks for cross-plugin extensibility,
dark mode support, and full uninstall cleanup. Refactors AI generator into
PSA_OpenRouter + PSA_KB_Builder classes. Adds PHPUnit tests for PostType and
Directory classes. Fixes QA findings: dead JS selector, renderError loading
state, numeric meta validation, prepared SQL in uninstall.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-13 21:30:11 +07:00
peptiderepo
0fa2707163 fix: resolve PHPCS PreparedSQL errors in cost tracker
Replace interpolated variables in SQL strings with concatenation
and add appropriate phpcs:ignore comments for safe table name usage
built from $wpdb->prefix. Fixes CI failure on WordPress Coding
Standards check.

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-11 19:09:53 +07:00
peptiderepo
12f1ac9056 chore: bump version to 4.1.0 for security, cost tracking, and bug fix release
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-11 19:02:58 +07:00
peptiderepo
4a5f2711a9 feat: add cost/token tracking, monthly budget system, and dry-run mode
- Create PSA_Cost_Tracker class with database table for API call logging
- Log prompt/completion tokens and estimated cost for every OpenRouter API call
- Implement monthly budget system with hard stop (budget of 0 = unlimited)
- Add budget checks in validate_peptide_name() and generate_peptide_content()
- Add dry_run() method to estimate costs before making API calls
- Display monthly usage summary and recent API logs in admin settings
- Add monthly_budget setting to admin interface with number input field
- Update uninstall.php to drop psa_api_logs table on plugin removal

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-11 18:59:19 +07:00
peptiderepo
4770f0a861 security: encrypt OpenRouter API key at rest using AES-256-CBC
- Create PSA_Encryption class with AES-256-CBC encrypt/decrypt methods
- Derive encryption key from wp_salt('auth') using SHA-256 hash
- Prepend IV to ciphertext and base64-encode for safe storage
- Update PSA_Admin to encrypt API keys on save, mask on display
- Preserve existing key when empty/mask value submitted (no overwrite)
- Update PSA_AI_Generator to decrypt API key on read from database
- Maintain backward compatibility with plaintext keys (auto-encrypt on next save)
- Prefer wp-config constant over database value for maximum security

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-11 18:56:22 +07:00
peptiderepo
54f9719516 docs: add ARCHITECTURE.md and CONVENTIONS.md
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-11 18:54:22 +07:00
peptiderepo
8e8d72e683 test: add PHPUnit infrastructure and unit tests for config and AI generator
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-11 18:53:24 +07:00
peptiderepo
4f894f255e perf: improve rate limiting resilience and reduce cache invalidation overhead
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-11 18:53:18 +07:00
peptiderepo
b1412d7824 fix: resolve JS typos breaking form submit and network error handling, fix CSS missing semicolon
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-11 18:52:26 +07:00
peptiderepo
866a8dc1ea security: apply 11 audit findings (2 critical, 4 high, 5 medium/low)
SEC-001 CRITICAL: Remove spoofable X-Forwarded-For/X-Real-IP from IP detection; trust only CF-Connecting-IP + REMOTE_ADDR
SEC-004 HIGH: Add peptide name input validation with character whitelist and prompt injection blocking
SEC-006 HIGH: Add missing return after wp_send_json_success in handle_pending_retry max-retries block
SEC-007 MEDIUM: KB articles now respect auto_publish setting instead of always publishing
SEC-009 MEDIUM: Replace hardcoded page ID 73 with configurable kb_page_id setting
SEC-010 MEDIUM: Fix cache invalidation — add underscore prefix to transient name pattern
SEC-011 MEDIUM: Skip sleep() during WP-Cron to avoid blocking PHP workers on rate limit retry
SEC-012 MEDIUM: Add global daily generation cap (50/day) to prevent cost overruns
SEC-013 LOW: Add @deprecated notice to unused PSA_Error class
SEC-015 LOW: Convert uninstall.php from space to tab indentation (WPCS)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-04-10 20:46:46 +07:00
peptiderepo
229fb577bf fix: resolve remaining PHPCS errors (short ternaries, array formatting, Yoda conditions) 2026-04-09 10:58:49 +07:00
peptiderepo
adc55c7c45 fix: convert space indentation to tabs for WPCS compliance
All 499 PHPCS errors were 'Tabs must be used to indent lines; spaces are not allowed'.
Converted 4-space indentation to tabs throughout class-psa-ai-generator.php.
2026-04-09 10:46:00 +07:00
peptiderepo
f08497241f Fix corrupted class-psa-ai-generator.php (restore clean version) 2026-04-08 20:30:19 +07:00
peptiderepo
8dadf8e353 fix: replace corrupted deploy.yml with clean workflow 2026-04-08 19:17:42 +07:00
peptiderepo
4457f70b0f ci: ignore PHPCS warnings on exit (only errors should fail CI) 2026-04-08 19:06:05 +07:00
peptiderepo
8ffd2013d8 Fix WPCS: split multi-item associative arrays in template.php 2026-04-08 19:02:16 +07:00
peptiderepo
9f384d861f Fix final WPCS errors: closing brace, short ternary, Yoda condition, multi-line array 2026-04-08 18:56:47 +07:00
peptiderepo
5e0830a744 style: fix WPCS tab indentation in pubchem, error, post-type, template classes 2026-04-08 18:44:45 +07:00
peptiderepo
0a2d7aeb4a style: fix WPCS violations in config and admin classes
- Align equals signs in PSA_Config constant definitions
- Convert space indentation to tabs in PSA_Admin
2026-04-08 18:31:57 +07:00
peptiderepo
8a311523c5 fix: replace class-psa-search.php with correct content (utf-8 blob) 2026-04-08 18:12:09 +07:00
peptiderepo
25a0c458b7 fix: add missing closing brace for rest_search() method in class-psa-search.php 2026-04-08 18:06:40 +07:00
peptiderepo
8fe543b726 fix: correct class-psa-search.php blob (was truncated in chunked upload)
Co-Authored-By: Claude <noreply@anthropic.com>
2026-04-08 17:44:57 +07:00