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36 Commits

Author SHA1 Message Date
peptiderepo
f1bc323d75 ci: adopt shared reusable deploy workflow (deploy-app.yml)
Replaces the per-repo staging/smoke/production jobs with one call to
peptiderepo/peptide-e2e/.github/workflows/deploy-app.yml (target_path=wp-content/themes/peptide-starter).
Validated end-to-end on the calculator pilot.

Agent-Session: cto rollout-reusable-deploy
2026-06-09 19:16:08 +07:00
peptiderepo
0a2a48a9f0 ci(audit): retry PR-association check (#58)
listPullRequestsAssociatedWithCommit is eventually-consistent after a squash
merge; the single immediate call intermittently flagged legit merges as
'direct push to main'. Now polls up to 5x/10s before opening an issue.

Agent-Session: cto audit-race-fix
2026-06-09 13:39:10 +07:00
peptiderepo
844951b268 feat(front-page): remove Science Feed card + 3-item news teaser (v2.2.2)
Merges PR #55. Science Feed removed from module grid (5 cards). Inline news feed replaced with 3-item teaser + CTA. Version 2.2.1 → 2.2.2.
2026-04-29 14:35:03 +07:00
peptiderepo
2b23bb7e2a feat: RCT inline abbreviation tooltip on verdict legend strip (v2.2.1) (#53)
CI green (PHP Lint 8.1/8.2/8.3 ✓, PHPCS ✓, PHPUnit 8.1/8.2/8.3 ✓). QA: PASS.
2026-04-29 13:29:04 +07:00
peptiderepo
bdc3ace6cf fix: mobile verdict explainer grid responsive layout (v2.2.0)
- Remove double horizontal padding from .hero-verdict-explainer section
  (ps-container inside already provides 24px padding on each side)
- Switch base grid to single column; add 520px breakpoint for 2-col
  (below 520px, columns are too narrow for 'Investigational' pill)
- Add min-width: 0 to grid items to prevent implicit size blowout
- Add max-width: 100% to .pr-verdict inside items as overflow guard
- Sync style.css with production state (server had drifted from v2.1.8 HEAD)

Fixes: right-column cards misaligned/clipped on narrow mobile viewports
2026-04-29 06:10:28 +00:00
peptiderepo
6f85210950 fix: add missing CSS for homepage verdict sections (v2.1.8)
hero-featured-verdicts, hero-verdict-card, and hero-verdict-explainer
classes were used in front-page.php but had no CSS rules, causing the
Featured Verdicts section to render with bare browser defaults.

- Add grid layout for verdict cards (1-col mobile, 3-col >=900px)
- Add card styling: border, padding, radius, shadow, hover lift
- Tint left border per verdict state via CSS :has()
- Add verdict explainer grid (2-col mobile, 3-col 640px, 5-col 900px)
- Add signal rows, summary, link, and footer button styling
2026-04-28 09:56:06 +00:00
peptiderepo
33faab7c4f ci: fix production SSH timeout — remove preflight verify step, add ConnectTimeout=30
The standalone SSH 'Verify deploy destination' step was causing consistent
connection timeouts (exit 255, ~2min hang) on production deploys. Root cause:
Hostinger rate-limits concurrent SSH connections from different GitHub Actions
runner IPs — the staging job exhausts a connection window and the production
runner (on a different IP) gets timed out by the server.

Fix:
- Remove the standalone SSH verify step that was always the first to time out
- Add ConnectTimeout=30 BatchMode=yes to ALL ssh/rsync commands so failures
  surface in 30s instead of the default 120s TCP timeout
- The plugin inventory pre/post check still guards against wrong-path deploys
  (the actual safety guarantee we care about from the 2026-04-23 incident)
- rsync itself will fail safely if the target path doesn't exist
2026-04-27 19:56:28 +00:00
peptiderepo
394df82bbe fix(hotfix): restore missing require_once for verdict-helpers + add Beehiiv attribution (v2.1.8)
v2.1.7 deploy had a truncated functions.php due to bash-mount write lag — missing
require_once for inc/verdict-meta.php and inc/verdict-helpers.php, which caused
a Fatal error on front-page.php:24 (undefined function peptide_starter_get_verdict_taxonomy).

Also adds the Beehiiv attribution enqueue (intended for v2.1.7 but lost in the
truncation). Site was down for ~30 min; production restored via direct SSH upload
before this commit.

- Restore: require_once inc/verdict-meta.php
- Restore: require_once inc/verdict-helpers.php
- Add: peptide_starter_enqueue_beehiiv_attribution() + wp_enqueue_scripts hook
2026-04-27 15:55:57 +00:00
peptiderepo
89a3ed66d3 ci: remove invalid continue-on-error from reusable workflow smoke job
Not valid on 'uses:' jobs — caused 0-job workflow failures. Theme prod
deploy already doesn't gate on smoke (needs: [validate, deploy-staging]).
Smoke remains informational.
2026-04-27 15:42:02 +00:00
peptiderepo
a7aad01af7 ci: add continue-on-error to smoke job
Smoke failures (e.g. Playwright infra issues) should not block reporting
a successful deploy as failed. Root cause of smoke failures fixed in
peptide-e2e@da79ee2 (explicit checkout in workflow_call context).
2026-04-27 15:38:35 +00:00
peptiderepo
4fa63e43cc feat(newsletter): Beehiiv signup integration — theme v2.1.7
- Add page-subscribe.php: single-column conversion template for /subscribe/
- Add peptide-newsletter-cta block to single-peptide.php (compact Beehiiv
  iframe at 180px height after article content, before prev/next nav)
- Add peptide_starter_enqueue_beehiiv_attribution() to functions.php:
  loads attribution.js site-wide in footer (one include covers all placements)
- Add 'Get our weekly digest →' footer CTA in column 1 linking to /subscribe/
  (styled accent-green; sits below brand blurb)

Form ID: 6edcd482-cbea-4767-8777-97ac17d6d609
Attribution tracking: https://subscribe-forms.beehiiv.com/attribution.js
2026-04-27 15:18:21 +00:00
peptiderepo
fb09e50c02 feat(content): Our Methodology page template + footer link (v2.1.6)
- Add page-our-methodology.php — two-column ToC template for /our-methodology/
  Mirrors page-how-we-review.php; CSS classes use page-our-methodology prefix
  #last-verified anchor is deep-link target for Phase 2 verdict-card lines
- Footer section 5: add Our Methodology link between How We Review + Editorial Standards
- Bump version to 2.1.6
2026-04-27 08:32:24 +00:00
peptiderepo
dbc3c01bc4 fix(css): featured verdicts vertical-rhythm — tighten badge→title, widen inter-card gap (v2.1.5)
Issue 1: badge→title gap tightened from 16px to 8px.
  Verdict badge is a label for the peptide name; card's uniform gap: --spacing-md
  made them look like separate paragraphs. Fix: margin-top offset on __title.

Issue 2: inter-card gap increased from --spacing-xl (32px) to --spacing-2xl (48px).
  Cards were visually merging into a single block. Card-to-card gap must clearly
  exceed within-card gaps to maintain the three-card hierarchy.

No functional or template changes — CSS-only.
2026-04-27 01:46:12 +00:00
peptiderepo
fdaea84d72 feat: B2 coming-soon badges on inactive tool cards (v2.1.4)
- Add 'coming_soon' key to module card definitions
- Protocol Builder, Tracker, Subject Log: coming_soon = true
- Calculator: fully active (shortcode_exists passes); no badge, no --inactive
- New .ps-module-card__badge: absolute top-right pill, --gray-200/--gray-700,
  Inter 600 10px; layers on top of --inactive dim treatment
- position: relative added to .ps-module-card to anchor the badge

CMO-approved in thread: 2026-04-site-wide-brand-adoption seq 10
2026-04-26 09:49:32 +00:00
peptiderepo
22716b4227 fix: calc shortcode name mismatch — prc_calculator not peptide_tools_calculator (v2.1.3)
page-calculator.php and module-cards.php were both checking for
'peptide_tools_calculator' which the plugin never registered.
The calc plugin (prc) registers 'prc_calculator' — template fell
through to the 'currently being set up' fallback on every request.
2026-04-26 09:06:03 +00:00
peptiderepo
03bedf1d6b feat(copy): homepage editorial voice — v2.1.2
Items 2, 3, 5 from CMO QA pass (seq 4):
- module-cards: H2 'Research Modules' → 'Tools'; subtitle + all 6 card
  descriptions rewritten in editorial voice (removed reagent/laboratory framing)
- footer: About blurb → verdict-driven guide framing
- front-page: news section H2 'Latest Peptide Research' → 'What\'s new';
  subtitle updated to match editorial voice
  (CMO seq 2 reversed 'Briefing' to avoid vocabulary collision with newsletter)

Version: 2.1.1 → 2.1.2
2026-04-26 06:25:47 +00:00
peptiderepo
3625c25655 fix: ci — remove empty ${{ }} expression from deploy.yml comment (YAML parse failure) 2026-04-26 05:27:04 +00:00
peptiderepo
e4bf5faf5b fix: ci — inline theme path in SSH verify step (was using undefined remote var)
The 'Verify deploy destination' step defined DEST on the runner then used
${DEST} inside an SSH command. The remote shell has no DEST variable, so
${DEST} expanded to empty → 'test -f /style.css' → always fails.

Fix: inline the full theme path using ${{ secrets.SSH_USERNAME }} which
the GitHub Actions runner expands to a literal string before the script
is sent to SSH. Remote shell receives a plain path with no variables.
2026-04-26 05:22:12 +00:00
peptiderepo
95985d5d30 ci: trigger clean pipeline run — verify production SSH post-secrets fix 2026-04-26 05:19:43 +00:00
peptiderepo
0cbeb91a77 ci: decouple production deploy from smoke gate
continue-on-error is not supported on reusable workflow (uses:) job calls —
the workflow was failing at setup with no jobs spawned.

Fix: remove smoke from deploy-production needs. Smoke tests still run in
parallel (for visibility) but production no longer waits on them. Re-add
smoke to needs once peptide-e2e suite is stable and exercising staging.
2026-04-26 05:12:27 +00:00
peptiderepo
2b25d7d872 ci: smoke gate — continue-on-error until peptide-e2e suite is wired
The smoke job calls peptiderepo/peptide-e2e which expects an e2e/ directory
that doesn't exist in this repo. Until that repo and its Playwright tests are
properly wired, a smoke failure must not block production deploy.

continue-on-error: true means tests still run (visible in Actions) but don't
gate the deploy. Remove this flag once the e2e suite reliably exercises the
staging environment.
2026-04-26 05:09:19 +00:00
peptiderepo
0cb4247b1a fix: ci — remove escaped $ in PIPESTATUS check (deploy.yml)
'test ${PIPESTATUS[0]} -eq 0' sends a literal backslash to bash, which
escapes the dollar sign and prevents variable expansion — test receives the
string '${PIPESTATUS[0]}' instead of an integer, causing exit code 2.

Fix: remove the backslash so bash expands PIPESTATUS correctly.
2026-04-26 05:02:23 +00:00
peptiderepo
27d9cc5831 fix: cookie notice brand alignment + bump v2.1.1
Yoast homepage title/meta: updated via WP-CLI on production (no code change):
  title:   'Peptide Repo — What the research really says'
  desc:    'Verdict-driven peptide guides for clinicians and informed readers.
            20 monographs across 5 verdict states...'
  (CMO QA feedback, seq 2, item 1)

style.css — Cookie Notice (Hu-manity.co) button override:
  #cn-accept-cookie, #cn-more-info: background !important → var(--teal-500)
  hover state → var(--teal-600)
  Reason: plugin renders inline style='background-color: #00a99d' which beats
  regular CSS selectors; !important is the correct override mechanism here.
  (CMO QA feedback, seq 2, item 4)

Version: 2.1.0-alpha.3 → 2.1.1
2026-04-26 04:59:55 +00:00
peptiderepo
f20a598bac ci: add staging step, smoke gate, concurrency block, deploy summary 2026-04-26 11:56:00 +07:00
peptiderepo
e3ab80f482 ci: standardize PHP matrix to 8.1/8.2/8.3 2026-04-26 11:55:58 +07:00
peptiderepo
aecb4bd1cb fix: PHPCS verdict-meta.php — fix all over-tabbed array keys + for-loop body indent
Four more 'single' keys had incorrect tab counts (same over-indentation
pattern as line 37 fixed in prior commit):
- Line 52 (verdict_text registration): 6 tabs → 3
- Line 66 (signal_row text, inside for loop): 8 tabs → 4
- Line 80 (signal_row glyph, inside for loop): 8 tabs → 4
- Line 97 (has_partner_link): 6 tabs → 3

For-loop body lines 173–175: were at 3 tabs (same level as the 'for'
statement); PHPCS requires body to be indented one level deeper → 4 tabs.

All pre-existing violations in verdict-meta.php are now cleared.
2026-04-26 04:34:09 +00:00
peptiderepo
08dc8480ba fix: PHPCS — replace multi-line HTML comments, fix verdict-meta array indent + PHP tag
front-page.php:
- Replace 3 decorative multi-line HTML comment blocks (tab+space mixed
  indentation) with single-line <!-- SECTION --> comments; eliminates 16
  'Tabs must be used' PHPCS errors at lines 37-41, 93-97, 127-132

inc/verdict-meta.php:
- Line 37: correct over-indented 'single' key (6 tabs → 3 tabs to match
  array alignment of sibling keys)
- Line 171: split '<?php for (...)' onto two lines so opening PHP tag is
  on a line by itself (WordPress PHPCS requirement)

Both are pre-existing violations now exposed because CI runs PHPCS on all
PHP files (not just changed ones). No functional change.
2026-04-26 04:32:27 +00:00
peptiderepo
3942c6b29e v2.1.0 fix — tabs, split verdict helpers, PHPCS clean
- Convert space indentation → tabs in front-page.php (PHPCS)
- Extract verdict taxonomy + config arrays → inc/verdict-helpers.php
- Wire verdict-helpers.php into functions.php
- front-page.php now 254 lines (was 309)
2026-04-26 04:26:59 +00:00
peptiderepo
4188bba014 v2.1.0 — Brand token adoption + homepage verdict sections
- Remap --color-brand-primary/--color-link-hover/--focus-shadow → teal tokens
- Hero search submit → lime-500/ink (CMO brief §6)
- Hero decorative shapes → teal/lime tints
- Hero wavy underline → teal
- front-page.php: verdict taxonomy explainer (5 states) + featured verdict cards
- inc/helpers.php: new brand copy defaults (hero title + subtitle)
2026-04-26 04:22:04 +00:00
peptiderepo
614ee2a2c3 fix: remove WP post date timestamp from verdict card (P2.2)
The verdict card was showing 'Updated [WP post creation date]' which doesn't
reflect the editorial last-reviewed date. Showing a wrong date is worse than
showing none. Timestamp removed; will re-add with last_reviewed_date post meta
in v1.1 when the review-cadence tracking system is ready to populate it.
2026-04-26 02:14:00 +00:00
peptiderepo
7b5f992a2a fix: CMO walkthrough P1 fixes — verdict_text, per-row glyphs, conditional disclosure, dark mode (v2.0.0-alpha.3)
P1.1: verdict_text meta field + card.php wiring
- Register verdict_text (textarea, show_in_rest) on peptide CPT
- card.php reads verdict_text meta; falls back to placeholder if empty
- Hardcoded generic placeholder no longer the default for published posts
- All 3 monographs populated with CMO-authored verdict text

P1.2: per-row glyph meta fields
- Register signal_row_1/2/3_glyph (enum: ✓|!|?|⊘|⚠, show_in_rest)
- card.php reads per-row glyph from meta instead of hardcoding by position
- Missing glyph renders nothing (not a wrong glyph)
- Semaglutide: ✓✓! | BPC-157: ✓!? | Melanotan-II: !!⚠

P1.3: conditional inline disclosure
- Register has_partner_link (boolean, default false, show_in_rest)
- single-peptide.php only renders inline disclosure when has_partner_link=true
- All 3 loaded monographs set to has_partner_link=false
- Footer disclosure unaffected (always renders)

N.1: dark mode toggle hidden
- header.php: toggle button hidden (display:none + aria-hidden)
- Dark-mode verdict colors not validated for v1; re-enable in v1.1

Meta box updated with textarea, glyph dropdowns, and partner-link checkbox.
2026-04-26 02:12:35 +00:00
peptiderepo
2fe536208b fix: correct CPT slug in verdict-meta.php (pr_peptide -> peptide)
The engineer registered verdict meta and the meta box against 'pr_peptide'
which does not exist. PR Core registers the CPT as 'peptide'. Result: the
verdict meta box was invisible in wp-admin and meta was not exposed in REST.
All functional register_post_meta and add_meta_box calls now target 'peptide'.
No data migration needed — post meta is keyed by meta_key, not CPT.
2026-04-25 20:35:14 +00:00
peptiderepo
ce08425270 fix: wire verdict card and disclosure into single-peptide.php (v2.0.0-alpha.2)
- Verdict card component was built in alpha.1 but never called from the
  template; no verdict state was rendering on any pr_peptide page.
  Now called immediately after the page header for posts with verdict_state.
- Affiliate disclosure (inline) was built in alpha.1 but never called.
  Now rendered after .peptide-content-box (below the_content / partner links)
  per the editorial disclosure spec: disclosure must follow the partner link.
- Suppress page-header <h1> when verdict_state is set; the verdict card
  already renders an <h1>, avoiding duplicate heading semantics / SEO issue.
2026-04-25 20:28:14 +00:00
peptiderepo
4f16ed9035 ci: verify deploy pipeline after SSH secret rotation 2026-04-25 20:11:19 +00:00
peptiderepo
2bb686a348 fix: PHPCS violations in brand components (Yoda conditions, array formatting, PHP tag) 2026-04-25 20:02:23 +00:00
peptiderepo
e23c141009 feat: brand identity v1.0.0 — Direction C Trusted Guide (theme v2.0.0-alpha.1)
Implements weeks 1–4 of the CMO brand identity sprint.

Key changes:
- CSS token system (assets/css/brand.css): full palette, verdict tokens, component styles
- Poppins/Inter/IBM Plex Mono Google Fonts loading with preload
- Full favicon/PWA/OG asset pack (peptide-repo-brand v1.0.0)
- 5-state verdict badge + card + evidence row components
- verdict_state + signal_row post meta on pr_peptide CPT
- Homepage hero: teal bg, new H1/subhead, lime search bar
- Archive verdict filter chips (CSS + pre_get_posts query hook)
- Affiliate disclosure component (3 contexts)
- page-how-we-review.php + page-about.php templates
- Footer Our Method links
- a11y: skip-to-content, reduced-motion, aria on verdict badges

QA: PASS (0 blockers) — qa-reviews/peptide-starter-theme/2026-04-26-a2bff59.md
Staging verified: https://staging.peptiderepo.com
2026-04-26 02:59:00 +07:00
22 changed files with 4417 additions and 3488 deletions

View File

@@ -22,7 +22,7 @@ jobs:
strategy:
fail-fast: false
matrix:
php: ['7.4', '8.1', '8.3']
php: ['8.1', '8.2', '8.3']
steps:
- uses: actions/checkout@v4
- name: Setup PHP ${{ matrix.php }}
@@ -62,7 +62,7 @@ jobs:
strategy:
fail-fast: false
matrix:
php: ['8.1']
php: ['8.1', '8.2', '8.3']
wp: ['latest']
services:
mysql:

View File

@@ -4,123 +4,36 @@ on:
push:
branches: [main]
concurrency:
group: deploy-peptide-starter-theme
cancel-in-progress: true
jobs:
validate:
name: Validate PHP & JS
runs-on: ubuntu-latest
steps:
- name: Checkout code
uses: actions/checkout@v4
- name: PHP Lint Check
run: |
find . -name "*.php" -not -path "./vendor/*" -not -path "./node_modules/*" -exec php -l {} \; | (grep -v "No syntax errors" || true) | head -20
test ${PIPESTATUS[0]} -eq 0
- name: Install PHPCS with WordPress standards
run: |
composer global config allow-plugins.dealerdirect/phpcodesniffer-composer-installer true
composer global require --dev squizlabs/php_codesniffer:"^3.0" wp-coding-standards/wpcs:"^3.0" phpcsstandards/phpcsutils:"^1.0"
- name: Run PHPCS (WordPress Core)
run: |
~/.composer/vendor/bin/phpcs -s .
~/.composer/vendor/bin/phpcs -s . || true # non-blocking during theme rollout
- name: JS Syntax Check
run: |
find assets/js -name "*.js" -exec node --check {} \;
deploy:
name: Deploy (shared pipeline)
needs: validate
name: Deploy to Production
runs-on: ubuntu-latest
steps:
- name: Checkout code
uses: actions/checkout@v4
- name: Setup SSH key
run: |
mkdir -p ~/.ssh
echo "${{ secrets.SSH_PRIVATE_KEY }}" > ~/.ssh/deploy_key
chmod 600 ~/.ssh/deploy_key
ssh-keyscan -p ${{ secrets.SSH_PORT }} ${{ secrets.SSH_HOST }} >> ~/.ssh/known_hosts 2>/tmp/keyscan.err || {
echo "::warning::ssh-keyscan failed (non-fatal). stderr:"
cat /tmp/keyscan.err || true
}
- name: Verify deploy destination is a theme directory
run: |
# Safety check: abort if destination does not look like a WordPress theme.
# Prevents rsync --delete from wiping the wrong directory if the path
# is ever mis-configured.
DEST="/home/${{ secrets.SSH_USERNAME }}/domains/peptiderepo.com/public_html/wp-content/themes/peptide-starter"
ssh -i ~/.ssh/deploy_key -p ${{ secrets.SSH_PORT }} -o StrictHostKeyChecking=no ${{ secrets.SSH_USERNAME }}@${{ secrets.SSH_HOST }} "test -f \"${DEST}/style.css\" || { echo \"ERROR: ${DEST}/style.css not found — aborting deploy to prevent rsync --delete wiping wrong directory\"; exit 1; }"
- name: Snapshot plugin inventory (pre-deploy)
run: |
# Record active plugins before deploy so we can verify nothing was
# accidentally wiped by rsync if the destination path drifts.
ssh -i ~/.ssh/deploy_key -p ${{ secrets.SSH_PORT }} -o StrictHostKeyChecking=no ${{ secrets.SSH_USERNAME }}@${{ secrets.SSH_HOST }} "wp --path=/home/${{ secrets.SSH_USERNAME }}/domains/peptiderepo.com/public_html plugin list --status=active --fields=name --allow-root 2>/dev/null | tee /tmp/plugins_pre_deploy.txt && echo \"Pre-deploy plugin count: $(wc -l < /tmp/plugins_pre_deploy.txt)\""
- name: Deploy via rsync
run: |
rsync -avz --delete \
--exclude='.git' \
--exclude='.github' \
--exclude='tests/' \
--exclude='phpunit.xml' \
--exclude='composer.json' \
--exclude='composer.lock' \
--exclude='vendor/' \
--exclude='node_modules/' \
--exclude='.phpcs.xml.dist' \
-e "ssh -i ~/.ssh/deploy_key -p ${{ secrets.SSH_PORT }} -o StrictHostKeyChecking=no" \
./ ${{ secrets.SSH_USERNAME }}@${{ secrets.SSH_HOST }}:/home/${{ secrets.SSH_USERNAME }}/domains/peptiderepo.com/public_html/wp-content/themes/peptide-starter/
- name: Verify plugin inventory unchanged (post-deploy)
run: |
# Fail the deploy if rsync wiped any plugins. Compares active plugin
# list before and after — any drop means something went wrong.
ssh -i ~/.ssh/deploy_key -p ${{ secrets.SSH_PORT }} -o StrictHostKeyChecking=no ${{ secrets.SSH_USERNAME }}@${{ secrets.SSH_HOST }} << 'ENDSSH'
wp --path=/home/${{ secrets.SSH_USERNAME }}/domains/peptiderepo.com/public_html plugin list --status=active --fields=name --allow-root 2>/dev/null > /tmp/plugins_post_deploy.txt
PRE=$(wc -l < /tmp/plugins_pre_deploy.txt)
POST=$(wc -l < /tmp/plugins_post_deploy.txt)
echo "Pre-deploy active plugins: $PRE"
echo "Post-deploy active plugins: $POST"
if [ "$POST" -lt "$PRE" ]; then
echo "ERROR: Plugin count dropped from $PRE to $POST after deploy."
echo "Missing plugins:"
diff /tmp/plugins_pre_deploy.txt /tmp/plugins_post_deploy.txt || true
exit 1
fi
echo "Plugin inventory OK."
ENDSSH
- name: Purge LiteSpeed Cache
run: |
ssh -i ~/.ssh/deploy_key -p ${{ secrets.SSH_PORT }} -o StrictHostKeyChecking=no \
${{ secrets.SSH_USERNAME }}@${{ secrets.SSH_HOST }} << 'ENDSSH'
CACHE_DIR="/home/${{ secrets.SSH_USERNAME }}/domains/peptiderepo.com/public_html/wp-content/litespeed"
if [ -d "$CACHE_DIR" ]; then
rm -rf "$CACHE_DIR"/*
echo "LiteSpeed cache purged."
fi
touch "/home/${{ secrets.SSH_USERNAME }}/domains/peptiderepo.com/public_html/.lscache_purge" 2>/dev/null || true
echo "Cache purge signal sent."
ENDSSH
- name: Cleanup
if: always()
run: rm -f ~/.ssh/deploy_key
- name: Health check
run: |
sleep 5
STATUS=$(curl -s -o /dev/null -w "%{http_code}" https://peptiderepo.com)
if [ "$STATUS" != "200" ] && [ "$STATUS" != "403" ]; then
echo "ERROR: Site returned unexpected HTTP $STATUS after deploy"
exit 1
fi
echo "Site is responsive (HTTP $STATUS)"
uses: peptiderepo/peptide-e2e/.github/workflows/deploy-app.yml@main
with:
target_path: wp-content/themes/peptide-starter
secrets: inherit

View File

@@ -29,12 +29,22 @@ jobs:
with:
script: |
const sha = context.sha;
const { data: prs } = await github.rest.repos.listPullRequestsAssociatedWithCommit({
owner: context.repo.owner,
repo: context.repo.repo,
commit_sha: sha,
});
const merged = prs.find(p => p.merged_at);
// Squash-merge -> PR association is eventually-consistent; poll briefly
// before concluding this was a direct push (avoids false positives on merges).
async function findMergedPR() {
for (let attempt = 1; attempt <= 5; attempt++) {
const { data: prs } = await github.rest.repos.listPullRequestsAssociatedWithCommit({
owner: context.repo.owner,
repo: context.repo.repo,
commit_sha: sha,
});
const m = prs.find(p => p.merged_at);
if (m) return m;
if (attempt < 5) await new Promise(r => setTimeout(r, 10000));
}
return null;
}
const merged = await findMergedPR();
if (merged) {
core.info(`OK: commit ${sha.substring(0,7)} came from PR #${merged.number}`);
return;

View File

@@ -1,132 +1,142 @@
# Peptide Starter Theme - Changelog
## [2.2.2] - 2026-04-29 — Front page layout restructure
### Changed
- `template-parts/module-cards.php`: Removed Science Feed from the module card
grid. The grid is for interactive tools only; news is content. Grid is now
5 cards: Peptides, Calculator, Protocol Builder, Tracker, Subject Log. No card
in this set goes inactive-dimmed due to a plugin registration check.
- `front-page.php`: Replaced the full `[peptide_news]` inline feed with a
3-item teaser row (`[peptide_news count="3"]`) and a "View all research →"
CTA linking to `/news`. Reduces page weight and drives traffic to the
dedicated news page.
## [2.2.1] - 2026-04-29 — RCT inline abbreviation tooltip
### Added
- `.pr-abbr` tap-target on the term "RCT" in the Established verdict card on
the verdict legend strip (homepage). Tapping/clicking opens a small inline
popover with the full definition: "Randomized Controlled Trial — the gold
standard for clinical evidence." Closes on outside click, Escape key, or
focus leaving the element.
- `assets/js/abbr-tooltip.js` — new JS module (~130 lines) for popover open/
close, outside-click dismissal, keyboard accessibility (Enter/Space/Escape),
and ARIA attributes (`aria-expanded`, `aria-describedby`, `role="tooltip"`).
Enqueued on front page only (`is_front_page()`).
- `peptide_starter_render_desc( string $text, array $abbrs ): string` helper in
`inc/verdict-helpers.php`. Builds safe HTML from `esc_html`/`esc_attr`
components; verdict taxonomy items carry an optional `abbrs` map.
- `.pr-abbr` and `.pr-abbr-popover` CSS in `style.css` — dashed underline
affordance, fade-in animation, dark-mode-safe surface variables.
### Fixed
- `PEPTIDE_STARTER_VERSION` constant in `functions.php` was stale at
`2.0.0-alpha.3`; realigned to `2.2.1` to match `style.css` Version header.
## [2.1.8] - 2026-04-28 — Homepage verdict section spacing fix
### Fixed
- Added missing CSS for `hero-featured-verdicts`, `hero-verdict-card`, and
`hero-verdict-explainer` BEM classes used in `front-page.php`. These classes
were referenced in the template but had zero CSS rules, causing the Featured
Verdicts section to render with bare browser defaults (no grid layout, no card
padding, no visual separation between verdict entries).
- Added responsive 3-column grid for verdict cards at ≥900px breakpoint.
- Added 5-column grid for verdict explainer items at ≥900px, 3-column at ≥640px.
- Verdict card left-border now tints to match verdict state via CSS `:has()`.
All notable changes to the Peptide Starter Theme are documented in this file.
## [2.0.0-alpha.1] - 2026-04-26 — Brand Identity v1.0.0 (Direction C: Trusted Guide)
## [2.1.7] - 2026-04-27 — Newsletter signup infrastructure (Beehiiv)
### Added
- Brand identity CSS token system in `assets/css/brand.css` (Direction C palette: Teal/Lime/Orange)
- Poppins + Inter + IBM Plex Mono font loading (Google Fonts) with preload/preconnect
- Full favicon/PWA/OG asset pack from peptide-repo-brand v1.0.0:
- Logo variants: horizontal, horizontal-reverse, horizontal-on-teal, mark, mark-small, wordmark, wordmark-reverse, mono
- Favicons: ICO + PNG 16/32/48, apple-touch-icon
- PWA icons and manifest
- og-default.png (1200×630) for social sharing fallback
- `inc/verdict-meta.php` — Post meta registration for pr_peptide CPT:
- `verdict_state` (required): established|promising|investigational|insufficient|cautionary
- `signal_row_1/2/3` (optional): evidence signal labels
- Meta box in pr_peptide edit screen with sanitization and nonce protection
- Verdict badge component (`template-parts/verdict/badge.php`) with state-specific glyphs
- Verdict card component (`template-parts/verdict/card.php`) for monograph hero with evidence rows
- Evidence signal row sub-component (`template-parts/verdict/evidence-row.php`)
- Affiliate disclosure component (`template-parts/affiliate-disclosure.php`) with 3 contexts:
- Inline (adjacent to links)
- Banner (page-top disclosure)
- Footer (persistent sitewide)
- `page-how-we-review.php` — How We Review Peptides page template with ToC sidebar
- `page-about.php` — About & Editorial Standards page template with disclosure block
- Footer "Our Method" link section pointing to verdict explainer and editorial standards
- Footer affiliate disclosure via template-part (footer context)
- OG image fallback meta tag in header.php (og-default.png)
- Favicon and PWA manifest links in header.php with theme-color
- SVG logo support in header via inline `logo-horizontal.svg` (fallback to text if unavailable)
- Skip-to-content link in header.php (screen reader text)
- Reduced-motion media query in brand.css for button transitions
### Changed
- `header.php`: Added font preconnect/preload/stylesheet links (Poppins, Inter, IBM Plex Mono)
- `header.php`: Swapped logo function to use inline SVG `logo-horizontal.svg` if available
- `functions.php`: Updated version to 2.0.0-alpha.1
- `functions.php`: Added `require_once` for new `inc/verdict-meta.php`
- `functions.php`: Enqueued `assets/css/brand.css` before main stylesheet (dependency order)
- `functions.php`: Footer widget area registration extended from 4 to 5 columns
- `footer.php`: Added "Our Method" footer section with two links
- `footer.php`: Integrated affiliate disclosure component (footer context)
- `inc/helpers.php`: Updated `peptide_starter_the_custom_logo()` to prefer SVG logo from `assets/brand/logo-horizontal.svg`
### Styling
- Brand CSS tokens cascade into existing theme; all new components use semantic token variables
- Verdict states (5-state taxonomy) signaled by color AND glyph AND label (never color-only)
- Lime (`#7FD600`) restricted to badge/button backgrounds with ink foreground (WCAG AA compliant)
- Prefers-reduced-motion honored for chip hover transitions
- All component BEM classes use `.pr-` prefix (brand) or `.ps-` prefix (theme); no collision with plugin prefixes (`.pn-`, `.psa-`, `.prab-`)
### Accessibility
- Verdict badge component: `role="img"` + `aria-label="Verdict: {State}"` for screen readers
- Glyph marked `aria-hidden="true"` to avoid redundant announcement
- Affiliate disclosure component: `<aside aria-label="Affiliate disclosure">` for context
- Skip-to-content link: `.screen-reader-text` class, keyboard-focusable
- All form inputs in verdict meta box properly labeled
- Evidence rows and card CTAs properly labeled and semantic
- `page-subscribe.php` — single-column conversion template for `/subscribe/` landing page.
No sticky ToC; signup-form-centric layout.
- `single-peptide.php` — compact Beehiiv signup block inserted after monograph article,
before prev/next navigation. Copy: "Want updates on monographs like this? One email a
week, no spam." Form ID: `6edcd482-cbea-4767-8777-97ac17d6d609`.
- `footer.php` column 1 — "Get our weekly digest →" link to `/subscribe/` below brand blurb.
- `functions.php` — `peptide_starter_enqueue_beehiiv_attribution()` loads Beehiiv's
`attribution.js` site-wide (footer, async) for UTM source capture across all placements.
### Notes
- Requires brand assets to be copied into `assets/brand/`. All 9 SVG logos + 7 raster files included.
- Theme logo currently from hardcoded SVG; custom logo upload still supported via fallback.
- Verdict system is opt-in: card renders only if `verdict_state` meta is set; graceful fallback if not.
- Affiliate disclosure copy is hardcoded (not DB-driven) in v1. Can migrate to post meta or settings in v2.
- Footer extends to 5 columns; "Our Method" section can be replaced via widget for footer-5.
- Dark mode: verdict colors were validated for light mode only. Dark mode support planned for v1.1.
## [1.7.0] - 2026-04-24 — Remove WooCommerce integration
- Beehiiv form ID and embed script URL are compile-time constants in the templates.
If the form ID changes, update `single-peptide.php` and `page-subscribe.php`.
- `single-repo_daily.php` and `archive-repo_daily.php` signup placements deferred to
the Repo Daily sprint (templates don't exist yet).
- Sender: `repo-weekly@mail.peptiderepo.com`. DNS records (SPF/DKIM/DMARC for
`mail.peptiderepo.com`) to be added by Terence in Cloudflare when Beehiiv
sending-domain verification runs.
## [1.7.0] - 2026-04-24 — Remove WooCommerce integration
## [2.1.6] - 2026-04-27 — Our Methodology page template + footer link
WooCommerce is not used on peptiderepo.com. Removing dead code reduces the asset
dequeue surface and eliminates the function_exists() guard introduced in the 2026-04-23
hotfix.
### Added
### Removed
- WooCommerce asset dequeue block from `inc/perf-asset-policy.php` (styles:
woocommerce-layout, woocommerce-smallscreen, woocommerce-general; scripts:
wc-add-to-cart, woocommerce, sourcebuster-js, wc-order-attribution)
- Cart icon in `header.php` (was conditional on `class_exists('WooCommerce')`)
- `peptide_starter_perf_woocommerce_styles` and `peptide_starter_perf_woocommerce_scripts`
filter hooks
- WooCommerce-specific tests from `tests/test-perf-asset-policy.php`
- WooCommerce section from README.md and CONVENTIONS.md
- `page-our-methodology.php` — two-column ToC template for the `/our-methodology/`
editorial-standards page. Mirrors `page-how-we-review.php` layout; CSS classes
use `page-our-methodology` prefix. The `#last-verified` anchor on this page is the
deep-link target for Phase 2 verdict-card "Last verified" lines.
- Footer "Our Method" section now includes **Our Methodology** link (`/our-methodology/`)
alongside How We Review Peptides and Editorial Standards.
### Notes
- No changes to existing templates, CSS, or JS.
- `footer.php` also backports the section-5 "Our Method" block from the v2.1.5 brand
sprint which was live on the server but not committed to the repo.
## [1.6.0] - 2026-04-23 — Mobile Performance Phase 1
Mobile-perf optimization targeting LCP reduction through conditional asset
dequeue, font weight slimming, and font server preconnect. Measured baseline
LCP on Moto G Power (Slow 4G): 5.4s; target after Phase 1: ~2.5s.
Mobile optimization targeting LCP reduction through conditional asset dequeue,
font weight slimming, and font server preconnect. Measured baseline LCP on
Moto G Power (Slow 4G): 5.4s; target: sub-4s after Phase 1 deployment.
### Added
### Performance improvements
- `inc/perf-asset-policy.php` — five-function module:
- `peptide_starter_perf_dequeue_plugin_assets()` — dequeues WooCommerce,
Elementor, and Ultimate Social Media Icons assets on pages that don't
use them. Hook: `wp_enqueue_scripts` priority 100.
- `peptide_starter_perf_slim_google_fonts()` — `style_loader_src` filter;
rewrites Roboto and Roboto Slab `family=` queries to keep only weights
actually used (400/500/700 + 400/700). Drops 72 font faces to 5.
- `peptide_starter_perf_resource_hints()` — `wp_resource_hints` filter;
adds preconnect hints for `fonts.googleapis.com` and `fonts.gstatic.com`.
- `peptide_starter_perf_defer_cookie_notice()` — `script_loader_tag` filter;
appends `defer` attribute to the cookie-notice front-end script.
- `peptide_starter_page_uses_elementor( int $post_id )` — helper.
- Kill-switch constant `PEPTIDE_STARTER_PERF_DEQUEUE` (default `true`).
Define `false` in `wp-config.php` to disable all dequeues instantly.
- Filterable handle lists: `peptide_starter_perf_woocommerce_handles`,
`peptide_starter_perf_elementor_handles`, `peptide_starter_perf_usmi_handles`,
`peptide_starter_perf_font_weights`.
- `tests/test-perf-asset-policy.php` — 13 unit-test cases covering kill-switch,
per-page-context dequeue logic, font slim happy/edge cases, filter overrides,
preconnect insertion, defer attribute application.
- **Conditional asset dequeue**: WooCommerce, Elementor, and USMI assets now
dequeue on pages that don't use them. Removes ~100KB from non-shop pages.
- **Google Fonts slimming**: Roboto and Roboto Slab trimmed from 72 faces to 5
(400/500/700 weights, no italics). Font CSS shrinks ~6KB → <1KB; woff2 payload
reduced ~80%.
- **Preconnect hints**: `fonts.googleapis.com` and `fonts.gstatic.com` now
preconnect in `<head>`, eliminating separate TLS handshake latency on cold cache.
- **Cookie-notice defer**: Cookie banner script deferred to unblock initial render.
### Changed
### Technical
- `style.css` Version header bumped 1.5.2 → 1.6.0.
- `PEPTIDE_STARTER_VERSION` constant bumped to `1.6.0`.
- New module `inc/perf-asset-policy.php` (~245 lines, PHPUnit tested).
- Kill-switch constant `PEPTIDE_STARTER_PERF_DEQUEUE` (default true) allows
disable via `wp-config.php` for rollback.
- All dequeue lists and font weights exposed as filters for customization.
- Production handle verification: WC (layout/smallscreen/general), Elementor
(frontend/frontend-legacy + per-post CSS), USMI (SFSImainCss + 4 scripts).
### Why
### Tests
PageSpeed Insights mobile score on `https://peptiderepo.com/` was 74 with
LCP 5.4s, FCP 2.6s. Desktop scored ~95 — the gap was mobile-specific
(weaker CPU + slower network amplify the cost of 13 render-blocking CSS
files in `<head>`, of which the homepage actually needed at most 4).
Phase 1 trims the asset graph for non-shop pages without touching plugin
code or template files.
- `test-perf-asset-policy.php` — 8 new unit cases covering dequeue conditions
(shop/non-shop/Elementor/USMI), font rewrite happy path and edge cases,
preconnect addition, defer application, and kill-switch disable.
### Out of scope
- Critical CSS inline (Phase 2 candidate after measuring Phase 1 lift).
- jQuery dequeue (WC/PSA/Elementor compat risk too high).
- Image optimizations (no images on homepage critical path).
- LiteSpeed Cache settings (CTO tunes post-deploy if Phase 1 insufficient).
### Breaking changes
None. All optimizations are transparent to plugin authors; dequeues use
standard WordPress APIs and can be overridden via filters or re-enqueued by
plugins if needed.
## [1.5.2] - 2026-04-14 — Security

134
assets/js/abbr-tooltip.js Normal file
View File

@@ -0,0 +1,134 @@
/**
* abbr-tooltip.js — Inline abbreviation popover for verdict legend screen.
*
* What: Opens a small popover anchored to any .pr-abbr element when tapped,
* clicked, or activated via keyboard. Closes on outside click or Escape.
* Who triggers: Enqueued by functions.php on is_front_page() requests only.
* Depends on: .pr-abbr elements in the DOM with data-def attributes; CSS in
* style.css (.pr-abbr-popover).
*
* @see inc/verdict-helpers.php — peptide_starter_render_desc() emits .pr-abbr elements
* @see style.css — .pr-abbr, .pr-abbr-popover visual styles
* @package peptide-starter
*/
( function () {
'use strict';
var POPOVER_CLASS = 'pr-abbr-popover';
var ACTIVE_CLASS = 'pr-abbr--active';
var activePopover = null;
var activeAbbr = null;
/**
* Remove the currently open popover, if any.
*
* @return {void}
*/
function closePopover() {
if ( activePopover ) {
activePopover.remove();
activePopover = null;
}
if ( activeAbbr ) {
activeAbbr.classList.remove( ACTIVE_CLASS );
activeAbbr.removeAttribute( 'aria-expanded' );
activeAbbr = null;
}
}
/**
* Create and position a popover anchored to the given abbr element.
*
* @param {HTMLElement} abbr - The .pr-abbr element that was activated.
* @return {void}
*/
function openPopover( abbr ) {
closePopover();
var def = abbr.getAttribute( 'data-def' );
if ( ! def ) {
return;
}
var popover = document.createElement( 'div' );
popover.className = POPOVER_CLASS;
popover.textContent = def;
popover.setAttribute( 'role', 'tooltip' );
popover.setAttribute( 'id', POPOVER_CLASS + '-' + Date.now() );
document.body.appendChild( popover );
// Position below the abbr, clamped to viewport width.
var rect = abbr.getBoundingClientRect();
var scrollTop = window.pageYOffset || document.documentElement.scrollTop;
var scrollLeft = window.pageXOffset || document.documentElement.scrollLeft;
var top = rect.bottom + scrollTop + 6;
var left = rect.left + scrollLeft;
var maxLeft = window.innerWidth - popover.offsetWidth - 16;
popover.style.top = top + 'px';
popover.style.left = Math.max( 8, Math.min( left, maxLeft ) ) + 'px';
abbr.classList.add( ACTIVE_CLASS );
abbr.setAttribute( 'aria-expanded', 'true' );
abbr.setAttribute( 'aria-describedby', popover.id );
activePopover = popover;
activeAbbr = abbr;
}
/**
* Toggle the popover for an abbr element (open if closed, close if open).
*
* @param {HTMLElement} abbr - The .pr-abbr element that was activated.
* @return {void}
*/
function togglePopover( abbr ) {
if ( activeAbbr === abbr ) {
closePopover();
} else {
openPopover( abbr );
}
}
// -------------------------------------------------------------------------
// Event listeners
// -------------------------------------------------------------------------
document.addEventListener( 'click', function ( e ) {
var abbr = e.target.closest( '.pr-abbr' );
if ( abbr ) {
e.stopPropagation();
togglePopover( abbr );
return;
}
// Click outside any abbr — close.
closePopover();
} );
document.addEventListener( 'keydown', function ( e ) {
if ( e.key === 'Escape' ) {
closePopover();
return;
}
if ( e.key === 'Enter' || e.key === ' ' ) {
var abbr = e.target.closest( '.pr-abbr' );
if ( abbr ) {
e.preventDefault();
togglePopover( abbr );
}
}
} );
// Close when focus leaves the popover+abbr pair entirely.
document.addEventListener( 'focusin', function ( e ) {
if (
activeAbbr &&
! activeAbbr.contains( e.target ) &&
( ! activePopover || ! activePopover.contains( e.target ) )
) {
closePopover();
}
} );
} )();

View File

@@ -31,7 +31,8 @@
// Default footer content if no widgets.
if ( 1 === $i ) {
echo '<h3>' . esc_html__( 'About', 'peptide-starter' ) . '</h3>';
echo '<p>' . esc_html__( 'Peptide Repo is a comprehensive scientific database for peptide research.', 'peptide-starter' ) . '</p>';
echo '<p>' . esc_html__( 'Verdict-driven peptide guides for clinicians and informed readers. Clear about the evidence — including when there isn\'t any.', 'peptide-starter' ) . '</p>';
echo '<p style="margin-top: var(--spacing-md); font-size: 0.9rem;"><a href="' . esc_url( home_url( '/subscribe' ) ) . '" style="color: var(--color-accent-green, #5a7c5a); font-weight: 600;">' . esc_html__( 'Get our weekly digest →', 'peptide-starter' ) . '</a></p>';
} elseif ( 2 === $i ) {
echo '<h3>' . esc_html__( 'Quick Links', 'peptide-starter' ) . '</h3>';
echo '<ul>';
@@ -56,6 +57,7 @@
echo '<h3>' . esc_html__( 'Our Method', 'peptide-starter' ) . '</h3>';
echo '<ul>';
echo '<li><a href="' . esc_url( home_url( '/how-we-review-peptides' ) ) . '">' . esc_html__( 'How We Review Peptides', 'peptide-starter' ) . '</a></li>';
echo '<li><a href="' . esc_url( home_url( '/our-methodology' ) ) . '">' . esc_html__( 'Our Methodology', 'peptide-starter' ) . '</a></li>';
echo '<li><a href="' . esc_url( home_url( '/about' ) ) . '">' . esc_html__( 'Editorial Standards', 'peptide-starter' ) . '</a></li>';
echo '</ul>';
}

View File

@@ -2,21 +2,38 @@
/**
* The front page template
*
* Layout: Hero → Research Modules → PRAutoBlogger posts → Peptide News feed.
* Newsletter signup is handled by footer.php (via template part) on the front page.
* Layout: Hero → Verdict Explainer → Featured Verdict Cards → Research Modules
* → PRAutoBlogger posts → Peptide News feed.
*
* @see template-parts/module-cards.php — research modules grid
* @see template-parts/newsletter-signup.php — included via footer.php on front page
* @see functions.php — helper functions for hero content
* Brand v2.0.0: Direction C "The Trusted Guide". Hero uses the 5-state verdict
* taxonomy as the central explainer hook. Three featured verdict cards pull from
* real monographs (semaglutide / BPC-157 / Melanotan-II) via post meta.
*
* @see template-parts/module-cards.php — research modules grid
* @see template-parts/verdict/badge.php — verdict badge component
* @see template-parts/verdict/card.php — full verdict card (monograph hero)
* @see inc/helpers.php — hero title / subtitle getters
* @see assets/css/brand.css — verdict token definitions
*
* @package peptide-starter
*/
get_header();
/** @see inc/verdict-helpers.php — peptide_starter_get_verdict_taxonomy() */
$verdict_taxonomy = peptide_starter_get_verdict_taxonomy();
/**
* Featured monograph post IDs. These are the three exemplar monographs
* loaded during brand sprint v2.0.0 (2026-04-26).
* Semaglutide=211 (established), BPC-157=36 (investigational), Melanotan-II=177 (cautionary).
*/
$featured_monograph_ids = array( 211, 36, 177 );
?>
<main id="main" class="site-main">
<!-- Hero Section -->
<!-- HERO SECTION -->
<section class="hero-section">
<div class="hero-content">
<h1 class="hero-title">
@@ -60,14 +77,134 @@ get_header();
<a href="<?php echo esc_url( home_url( '/peptides' ) ); ?>" class="ps-btn ps-btn-primary">
<?php esc_html_e( 'Browse Peptides', 'peptide-starter' ); ?>
</a>
<a href="<?php echo esc_url( home_url( '/documentation' ) ); ?>" class="ps-btn ps-btn-secondary">
<?php esc_html_e( 'Documentation', 'peptide-starter' ); ?>
<a href="<?php echo esc_url( home_url( '/how-we-review-peptides' ) ); ?>" class="ps-btn ps-btn-secondary">
<?php esc_html_e( 'Our method', 'peptide-starter' ); ?>
</a>
</div>
</div>
</section>
<!-- Research Modules Grid (6 cards) -->
<!-- VERDICT TAXONOMY EXPLAINER -->
<section class="hero-verdict-explainer" aria-label="<?php esc_attr_e( 'Our verdict system', 'peptide-starter' ); ?>">
<div class="ps-container">
<p class="hero-verdict-explainer__heading">
<?php esc_html_e( 'Every peptide gets a verdict. Here\'s what they mean.', 'peptide-starter' ); ?>
</p>
<div class="hero-verdict-explainer__grid">
<?php foreach ( $verdict_taxonomy as $v ) : ?>
<div class="hero-verdict-explainer__item">
<span
class="pr-verdict pr-verdict--<?php echo esc_attr( $v['state'] ); ?>"
role="img"
aria-label="<?php echo esc_attr( sprintf( __( 'Verdict: %s', 'peptide-starter' ), $v['label'] ) ); ?>"
>
<span class="pr-verdict__glyph" aria-hidden="true"><?php echo esc_html( $v['glyph'] ); ?></span>
<span class="pr-verdict__label"><?php echo esc_html( $v['label'] ); ?></span>
</span>
<p class="hero-verdict-explainer__desc"><?php echo peptide_starter_render_desc( $v['description'], $v['abbrs'] ?? array() ); // phpcs:ignore WordPress.Security.EscapeOutput.OutputNotEscaped -- output is built from esc_html/esc_attr components inside render_desc(). ?></p>
</div>
<?php endforeach; ?>
</div>
<p class="hero-verdict-explainer__cta-line">
<a href="<?php echo esc_url( home_url( '/how-we-review-peptides' ) ); ?>" class="ps-btn ps-btn-tertiary ps-btn-sm">
<?php esc_html_e( 'How we assign verdicts →', 'peptide-starter' ); ?>
</a>
</p>
</div>
</section>
<!-- FEATURED VERDICT CARDS: semaglutide=211 (Established), BPC-157=36 (Investigational), Melanotan-II=177 (Cautionary) -->
<?php
$featured_posts = get_posts(
array(
'post__in' => $featured_monograph_ids,
'post_type' => 'peptide',
'posts_per_page' => 3,
'orderby' => 'post__in',
'post_status' => 'publish',
)
);
if ( ! empty( $featured_posts ) ) :
?>
<section class="hero-featured-verdicts" aria-label="<?php esc_attr_e( 'Featured peptide verdicts', 'peptide-starter' ); ?>">
<div class="ps-container">
<h2 class="hero-featured-verdicts__title"><?php esc_html_e( 'Featured verdicts', 'peptide-starter' ); ?></h2>
<p class="hero-featured-verdicts__subtitle">
<?php esc_html_e( 'Real assessments from our database — see the system in action.', 'peptide-starter' ); ?>
</p>
<div class="hero-featured-verdicts__grid">
<?php
foreach ( $featured_posts as $featured_post ) :
$post_id = $featured_post->ID;
$verdict_state = get_post_meta( $post_id, 'verdict_state', true );
$verdict_text = get_post_meta( $post_id, 'verdict_text', true );
$post_url = get_permalink( $post_id );
// Verdict state config — @see inc/verdict-helpers.php
$verdict_config = peptide_starter_get_verdict_config();
$vc = isset( $verdict_config[ $verdict_state ] ) ? $verdict_config[ $verdict_state ] : null;
// Signal rows (up to 3).
$signal_rows = array();
for ( $i = 1; $i <= 3; $i++ ) {
$row_label = get_post_meta( $post_id, 'signal_row_' . $i . '_label', true );
$row_glyph = get_post_meta( $post_id, 'signal_row_' . $i . '_glyph', true );
if ( $row_label ) {
$signal_rows[] = array(
'label' => $row_label,
'glyph' => $row_glyph ? $row_glyph : '•',
);
}
}
?>
<article class="hero-verdict-card" aria-label="<?php echo esc_attr( get_the_title( $post_id ) ); ?>">
<?php if ( $vc ) : ?>
<span
class="pr-verdict pr-verdict--<?php echo esc_attr( $verdict_state ); ?> hero-verdict-card__badge"
role="img"
aria-label="<?php echo esc_attr( sprintf( __( 'Verdict: %s', 'peptide-starter' ), $vc['label'] ) ); ?>"
>
<span class="pr-verdict__glyph" aria-hidden="true"><?php echo esc_html( $vc['glyph'] ); ?></span>
<span class="pr-verdict__label"><?php echo esc_html( $vc['label'] ); ?></span>
</span>
<?php endif; ?>
<h3 class="hero-verdict-card__title">
<a href="<?php echo esc_url( $post_url ); ?>"><?php echo esc_html( get_the_title( $post_id ) ); ?></a>
</h3>
<?php if ( $verdict_text ) : ?>
<p class="hero-verdict-card__summary"><?php echo esc_html( $verdict_text ); ?></p>
<?php endif; ?>
<?php if ( ! empty( $signal_rows ) ) : ?>
<ul class="hero-verdict-card__signals" aria-label="<?php esc_attr_e( 'Evidence signals', 'peptide-starter' ); ?>">
<?php foreach ( $signal_rows as $row ) : ?>
<li class="hero-verdict-card__signal-item">
<span class="hero-verdict-card__signal-glyph" aria-hidden="true"><?php echo esc_html( $row['glyph'] ); ?></span>
<?php echo esc_html( $row['label'] ); ?>
</li>
<?php endforeach; ?>
</ul>
<?php endif; ?>
<a href="<?php echo esc_url( $post_url ); ?>" class="hero-verdict-card__link">
<?php esc_html_e( 'Read the full evidence →', 'peptide-starter' ); ?>
</a>
</article>
<?php endforeach; ?>
</div>
<div class="hero-featured-verdicts__footer">
<a href="<?php echo esc_url( home_url( '/peptides' ) ); ?>" class="ps-btn ps-btn-secondary">
<?php esc_html_e( 'Browse all peptides', 'peptide-starter' ); ?>
</a>
</div>
</div>
</section>
<?php endif; ?>
<!-- Research Modules Grid (5 cards) -->
<?php get_template_part( 'template-parts/module', 'cards' ); ?>
<!-- PRAutoBlogger Posts Widget -->
@@ -77,24 +214,29 @@ get_header();
}
?>
<!-- News Feed Section -->
<!-- News Teaser Section — 3 items + "View all" CTA -->
<?php
if ( shortcode_exists( 'peptide_news' ) ) {
?>
<section class="news-feed-section">
<section class="news-teaser-section">
<div class="ps-container">
<div class="news-feed-header">
<h2 class="news-feed-title"><?php esc_html_e( 'Latest Peptide Research', 'peptide-starter' ); ?></h2>
<p class="news-feed-description">
<?php esc_html_e( 'Stay updated with the latest developments in peptide science and research.', 'peptide-starter' ); ?>
</p>
<div class="news-teaser-header">
<div>
<h2><?php esc_html_e( 'Latest Peptide Research', 'peptide-starter' ); ?></h2>
<p><?php esc_html_e( 'Recent publications from leading research sources.', 'peptide-starter' ); ?></p>
</div>
<a href="<?php echo esc_url( home_url( '/news' ) ); ?>" class="ps-btn ps-btn-secondary">
<?php esc_html_e( 'View all research →', 'peptide-starter' ); ?>
</a>
</div>
<?php echo do_shortcode( '[peptide_news]' ); ?>
<?php echo do_shortcode( '[peptide_news count="3"]' ); ?>
</div>
</section>
<?php
}
?>
</main>
<?php get_footer(); ?>

View File

@@ -26,7 +26,7 @@ if ( ! defined( 'ABSPATH' ) ) {
}
// Theme constants.
define( 'PEPTIDE_STARTER_VERSION', '2.0.0-alpha.1' );
define( 'PEPTIDE_STARTER_VERSION', '2.2.2' );
define( 'PEPTIDE_STARTER_DIR', get_template_directory() );
define( 'PEPTIDE_STARTER_URI', get_template_directory_uri() );
@@ -45,6 +45,7 @@ require_once PEPTIDE_STARTER_DIR . '/inc/newsletter-admin.php';
require_once PEPTIDE_STARTER_DIR . '/inc/mail-diagnostic.php';
require_once PEPTIDE_STARTER_DIR . '/inc/perf-asset-policy.php';
require_once PEPTIDE_STARTER_DIR . '/inc/verdict-meta.php';
require_once PEPTIDE_STARTER_DIR . '/inc/verdict-helpers.php';
/**
* Set up theme defaults and register support for WordPress features.
@@ -87,6 +88,11 @@ function peptide_starter_scripts() {
wp_enqueue_script( 'peptide-starter-theme', PEPTIDE_STARTER_URI . '/assets/js/theme.js', array(), PEPTIDE_STARTER_VERSION, true );
wp_enqueue_script( 'peptide-starter-settings-panel', PEPTIDE_STARTER_URI . '/assets/js/settings-panel.js', array(), PEPTIDE_STARTER_VERSION, true );
// Abbreviation popovers — only needed on the front page verdict legend strip.
if ( is_front_page() ) {
wp_enqueue_script( 'peptide-starter-abbr-tooltip', PEPTIDE_STARTER_URI . '/assets/js/abbr-tooltip.js', array(), PEPTIDE_STARTER_VERSION, true );
}
wp_localize_script(
'peptide-starter-theme',
'peptideStarterData',
@@ -243,3 +249,20 @@ function peptide_starter_inline_dark_mode_script() {
<?php
}
add_action( 'wp_head', 'peptide_starter_inline_dark_mode_script' );
/**
* Enqueue Beehiiv attribution script site-wide.
*
* Loads Beehiiv's attribution.js in the footer so all signup form placements
* (subscribe page iframe, single-peptide inline form) are tracked correctly
* under a single script include.
*
* Who calls it: wp_enqueue_scripts action (all front-end page loads).
* Dependencies: none.
*
* @return void
*/
function peptide_starter_enqueue_beehiiv_attribution() {
wp_enqueue_script( 'beehiiv-attribution', 'https://subscribe-forms.beehiiv.com/attribution.js', array(), null, true );
}
add_action( 'wp_enqueue_scripts', 'peptide_starter_enqueue_beehiiv_attribution' );

View File

@@ -118,7 +118,8 @@
</button>
<!-- Dark Mode Toggle -->
<button class="header-icon-btn dark-mode-toggle" aria-label="<?php esc_attr_e( 'Toggle dark mode', 'peptide-starter' ); ?>">
<!-- Dark mode disabled for v1: verdict-color accessibility only validated for light mode. Re-enable in v1.1 after dark palette audit. -->
<button class="header-icon-btn dark-mode-toggle" aria-label="<?php esc_attr_e( 'Toggle dark mode', 'peptide-starter' ); ?>" style="display:none;" aria-hidden="true">
<svg class="sun-icon" width="20" height="20" viewBox="0 0 20 20" fill="none" xmlns="http://www.w3.org/2000/svg" style="display: none;">
<circle cx="10" cy="10" r="4" stroke="currentColor" stroke-width="2"/>
<path d="M10 1V3M10 17V19M19 10H17M3 10H1M16.657 16.657L15.243 15.243M4.757 4.757L3.343 3.343M16.657 3.343L15.243 4.757M4.757 15.243L3.343 16.657" stroke="currentColor" stroke-width="2" stroke-linecap="round"/>

View File

@@ -155,7 +155,7 @@ function peptide_starter_the_custom_logo() {
* @return string Hero title text.
*/
function peptide_starter_get_hero_title() {
return get_theme_mod( 'hero_title', get_bloginfo( 'name' ) );
return get_theme_mod( 'hero_title', esc_html__( 'Is this peptide right for you?', 'peptide-starter' ) );
}
/**
@@ -164,7 +164,7 @@ function peptide_starter_get_hero_title() {
* @return string Hero subtitle text.
*/
function peptide_starter_get_hero_subtitle() {
return get_theme_mod( 'hero_subtitle', esc_html__( 'A scientific peptide reference database', 'peptide-starter' ) );
return get_theme_mod( 'hero_subtitle', esc_html__( 'What the research really says', 'peptide-starter' ) );
}
/**

137
inc/verdict-helpers.php Normal file
View File

@@ -0,0 +1,137 @@
<?php
/**
* Verdict helper functions for homepage and template parts.
*
* What: Provides data arrays for the 5-state verdict taxonomy used in the
* homepage explainer strip and featured verdict cards.
* Who triggers: Required by functions.php on every page load.
* Depends on: Nothing — pure data functions, no WP dependencies.
*
* @see inc/verdict-meta.php — verdict CPT meta registration
* @see template-parts/verdict/ — badge, card, evidence-row components
* @see front-page.php — homepage verdict sections
*
* @package peptide-starter
*/
/**
* Returns the verdict taxonomy data array for the homepage explainer strip.
*
* Canonical order matches CMO brief §5.1 and the 5-state enum in verdict-meta.php.
*
* @return array[] Each element: state (string), glyph (string), label (string), description (string), abbrs (array, optional).
*/
function peptide_starter_get_verdict_taxonomy() {
return array(
array(
'state' => 'established',
'glyph' => '✓',
'label' => 'Established',
'description' => 'Strong RCT evidence; widely prescribed or validated.',
// abbrs: terms in description that should render as inline tap-targets.
'abbrs' => array(
'RCT' => 'Randomized Controlled Trial — the gold standard for clinical evidence. Participants are randomly assigned to treatment or control groups to measure real effect.',
),
),
array(
'state' => 'promising',
'glyph' => '◐',
'label' => 'Promising',
'description' => 'Meaningful human data accumulating; not yet RCT-strong.',
),
array(
'state' => 'investigational',
'glyph' => '?',
'label' => 'Investigational',
'description' => 'Mechanism plausible; human trials sparse.',
),
array(
'state' => 'insufficient',
'glyph' => '⊘',
'label' => 'Insufficient Evidence',
'description' => 'Not enough data to say anything responsible.',
),
array(
'state' => 'cautionary',
'glyph' => '⚠',
'label' => 'Cautionary',
'description' => 'Active safety signals or misuse patterns.',
),
);
}
/**
* Returns the verdict state config map (glyph + label per state slug).
*
* Used by featured verdict cards on the homepage and any template that needs
* to render a verdict badge from a state string without loading the full card.
*
* @return array Keyed by state slug. Each value: array{ glyph: string, label: string }.
*/
function peptide_starter_get_verdict_config() {
return array(
'established' => array(
'glyph' => '✓',
'label' => 'Established',
),
'promising' => array(
'glyph' => '◐',
'label' => 'Promising',
),
'investigational' => array(
'glyph' => '?',
'label' => 'Investigational',
),
'insufficient' => array(
'glyph' => '⊘',
'label' => 'Insufficient Evidence',
),
'cautionary' => array(
'glyph' => '⚠',
'label' => 'Cautionary',
),
);
}
/**
* Renders a description string with optional inline abbreviation tap-targets.
*
* What: Builds safe HTML for a verdict card description, replacing known
* abbreviation terms with <abbr> elements that trigger a tooltip.
* Who calls it: front-page.php verdict explainer loop.
* Depends on: Nothing — pure string transformation.
*
* The output is intentionally built from escaped components (not from raw $text)
* so we never expose unescaped user or data-layer content. Each substitution is:
* esc_html( $text ) → str_replace( literal_term, safe_abbr_html )
* This is safe because the abbr tag, class, and data-def are all hardcoded or
* escaped here, and the term key is a literal constant from our own data array.
*
* @param string $text Plain-text description string. Will be HTML-escaped.
* @param array $abbrs Associative array of term => definition. Keys are literal
* strings (e.g. 'RCT'). Values are plain-text definitions.
* @return string Safe HTML string suitable for echo without further escaping.
*
* @see inc/verdict-helpers.php — $abbrs data lives in peptide_starter_get_verdict_taxonomy()
* @see assets/js/abbr-tooltip.js — JS that handles tap/click to show the popover
* @see style.css — .pr-abbr and .pr-abbr-popover styles
*/
function peptide_starter_render_desc( string $text, array $abbrs ): string {
$html = esc_html( $text );
foreach ( $abbrs as $term => $definition ) {
$safe_term = esc_html( $term );
$safe_def = esc_attr( $definition );
$abbr_html = sprintf(
'<abbr class="pr-abbr" data-def="%s" tabindex="0" role="button" aria-label="%s: %s">%s</abbr>',
$safe_def,
$safe_term,
$safe_def,
$safe_term
);
// Replace only the first occurrence — abbreviations should not stack.
$html = preg_replace( '/' . preg_quote( $safe_term, '/' ) . '/', $abbr_html, $html, 1 );
}
return $html;
}

View File

@@ -2,11 +2,15 @@
/**
* Verdict System Post Meta Registration & Meta Box
*
* Registers post meta for pr_peptide CPT:
* Registers post meta for peptide CPT:
* - verdict_state (required): one of 5 states
* - signal_row_1, signal_row_2, signal_row_3 (optional): evidence signal labels
* - verdict_text (required for launch): 3–5 sentence opinionated verdict
* - signal_row_1/2/3 (optional): evidence signal label text
* - signal_row_1/2/3_glyph (optional): per-row glyph; enum ✓|!|?|⊘|⚠
* - has_partner_link (bool, default false): controls inline disclosure render
*
* Adds a meta box to the pr_peptide edit screen for managing these fields.
* Who calls it: loaded by functions.php via require_once.
* Depends on: nothing — pure WP register_post_meta.
*
* @package peptide-starter
*/
@@ -16,20 +20,20 @@ if ( ! defined( 'ABSPATH' ) ) {
}
/**
* Register verdict post meta for pr_peptide CPT.
* Register verdict post meta for peptide CPT.
*
* @return void
*/
function peptide_starter_register_verdict_meta() {
$allowed_states = array( 'established', 'promising', 'investigational', 'insufficient', 'cautionary' );
$allowed_states = array( 'established', 'promising', 'investigational', 'insufficient', 'cautionary' );
$allowed_glyphs = array( '✓', '!', '?', '⊘', '⚠' );
// Register verdict_state meta.
register_post_meta(
'pr_peptide',
'peptide',
'verdict_state',
array(
'type' => 'string',
'description' => 'Verdict classification state',
'single' => true,
'show_in_rest' => true,
'auth_callback' => '__return_true',
@@ -39,26 +43,68 @@ function peptide_starter_register_verdict_meta() {
)
);
// Register signal row meta (up to 3).
// Register verdict_text meta — 3–5 sentence opinionated verdict paragraph.
register_post_meta(
'peptide',
'verdict_text',
array(
'type' => 'string',
'single' => true,
'show_in_rest' => true,
'auth_callback' => '__return_true',
'sanitize_callback' => 'sanitize_textarea_field',
)
);
// Register signal row text meta (up to 3 rows).
for ( $i = 1; $i <= 3; $i++ ) {
register_post_meta(
'pr_peptide',
'peptide',
'signal_row_' . $i,
array(
'type' => 'string',
'description' => 'Evidence signal row ' . $i,
'single' => true,
'show_in_rest' => true,
'auth_callback' => '__return_true',
'sanitize_callback' => 'sanitize_text_field',
)
);
// Register per-row glyph meta.
// Validated as one of the 5-state glyph set to keep visual vocabulary consistent.
register_post_meta(
'peptide',
'signal_row_' . $i . '_glyph',
array(
'type' => 'string',
'single' => true,
'show_in_rest' => true,
'auth_callback' => '__return_true',
'sanitize_callback' => function ( $value ) use ( $allowed_glyphs ) {
return ( '' === $value || in_array( $value, $allowed_glyphs, true ) ) ? $value : '';
},
)
);
}
// Register has_partner_link — gates inline affiliate disclosure rendering.
// Default false: disclosure is suppressed unless a partner link is explicitly present.
register_post_meta(
'peptide',
'has_partner_link',
array(
'type' => 'boolean',
'single' => true,
'show_in_rest' => true,
'auth_callback' => '__return_true',
'default' => false,
)
);
}
add_action( 'init', 'peptide_starter_register_verdict_meta' );
/**
* Add verdict meta box to pr_peptide edit screen.
* Add verdict meta box to peptide CPT edit screen.
*
* @return void
*/
@@ -67,7 +113,7 @@ function peptide_starter_add_verdict_meta_box() {
'peptide_starter_verdict',
esc_html__( 'Verdict System', 'peptide-starter' ),
'peptide_starter_render_verdict_meta_box',
'pr_peptide',
'peptide',
'normal',
'high'
);
@@ -83,23 +129,24 @@ add_action( 'add_meta_boxes', 'peptide_starter_add_verdict_meta_box' );
function peptide_starter_render_verdict_meta_box( $post ) {
wp_nonce_field( 'peptide_starter_verdict_nonce', 'peptide_starter_verdict_nonce' );
$verdict_state = get_post_meta( $post->ID, 'verdict_state', true );
$signal_row_1 = get_post_meta( $post->ID, 'signal_row_1', true );
$signal_row_2 = get_post_meta( $post->ID, 'signal_row_2', true );
$signal_row_3 = get_post_meta( $post->ID, 'signal_row_3', true );
$allowed_states = array(
'established' => esc_html__( 'Established', 'peptide-starter' ),
'promising' => esc_html__( 'Promising', 'peptide-starter' ),
'investigational' => esc_html__( 'Investigational', 'peptide-starter' ),
'insufficient' => esc_html__( 'Insufficient Evidence', 'peptide-starter' ),
'cautionary' => esc_html__( 'Cautionary', 'peptide-starter' ),
$verdict_state = get_post_meta( $post->ID, 'verdict_state', true );
$verdict_text = get_post_meta( $post->ID, 'verdict_text', true );
$allowed_states = array(
'established' => esc_html__( 'Established', 'peptide-starter' ),
'promising' => esc_html__( 'Promising', 'peptide-starter' ),
'investigational' => esc_html__( 'Investigational', 'peptide-starter' ),
'insufficient' => esc_html__( 'Insufficient Evidence', 'peptide-starter' ),
'cautionary' => esc_html__( 'Cautionary', 'peptide-starter' ),
);
$allowed_glyphs = array( '✓', '!', '?', '⊘', '⚠' );
$has_partner = (bool) get_post_meta( $post->ID, 'has_partner_link', true );
?>
<div style="padding: 12px 0;">
<label for="verdict_state" style="display: block; margin-bottom: 8px;">
<div style="padding:12px 0;">
<label for="verdict_state" style="display:block;margin-bottom:6px;">
<strong><?php esc_html_e( 'Verdict State', 'peptide-starter' ); ?></strong>
</label>
<select id="verdict_state" name="verdict_state" style="width: 100%; padding: 8px; font-size: 14px;">
<select id="verdict_state" name="verdict_state" style="width:100%;padding:8px;font-size:14px;margin-bottom:16px;">
<option value=""><?php esc_html_e( '— Select —', 'peptide-starter' ); ?></option>
<?php foreach ( $allowed_states as $key => $label ) : ?>
<option value="<?php echo esc_attr( $key ); ?>" <?php selected( $verdict_state, $key ); ?>>
@@ -108,22 +155,70 @@ function peptide_starter_render_verdict_meta_box( $post ) {
<?php endforeach; ?>
</select>
<div style="margin-top: 20px;">
<label style="display: block; margin-bottom: 4px;">
<strong><?php esc_html_e( 'Signal Row 1', 'peptide-starter' ); ?></strong>
</label>
<input type="text" name="signal_row_1" value="<?php echo esc_attr( $signal_row_1 ); ?>" placeholder="<?php esc_attr_e( 'e.g., Strong animal evidence', 'peptide-starter' ); ?>" style="width: 100%; padding: 8px; font-size: 14px; margin-bottom: 12px;">
<label for="verdict_text" style="display:block;margin-bottom:6px;">
<strong><?php esc_html_e( 'Our Verdict (3–5 sentences)', 'peptide-starter' ); ?></strong>
<span style="font-weight:normal;font-size:12px;color:#666;display:block;margin-top:2px;">
<?php esc_html_e( 'The opinionated verdict paragraph shown on the card hero. Be specific — this is the brand\'s editorial spine.', 'peptide-starter' ); ?>
</span>
</label>
<textarea id="verdict_text" name="verdict_text" rows="5"
style="width:100%;padding:8px;font-size:14px;margin-bottom:16px;"
placeholder="<?php esc_attr_e( 'e.g., Semaglutide works. The data is among the strongest of any peptide therapy...', 'peptide-starter' ); ?>"><?php echo esc_textarea( $verdict_text ); ?></textarea>
<label style="display: block; margin-bottom: 4px;">
<strong><?php esc_html_e( 'Signal Row 2', 'peptide-starter' ); ?></strong>
</label>
<input type="text" name="signal_row_2" value="<?php echo esc_attr( $signal_row_2 ); ?>" placeholder="<?php esc_attr_e( 'e.g., Limited human data', 'peptide-starter' ); ?>" style="width: 100%; padding: 8px; font-size: 14px; margin-bottom: 12px;">
<hr style="border:none;border-top:1px solid #ddd;margin:8px 0 16px;">
<p style="font-weight:bold;margin-bottom:8px;"><?php esc_html_e( 'Evidence Signal Rows', 'peptide-starter' ); ?></p>
<?php
for ( $i = 1; $i <= 3; $i++ ) :
$row_text = get_post_meta( $post->ID, 'signal_row_' . $i, true );
$row_glyph = get_post_meta( $post->ID, 'signal_row_' . $i . '_glyph', true );
?>
<div style="display:flex;gap:8px;align-items:flex-start;margin-bottom:12px;">
<div style="flex:0 0 80px;">
<label for="signal_row_<?php echo esc_attr( $i ); ?>_glyph"
style="display:block;margin-bottom:4px;font-size:12px;color:#444;">
<?php esc_html_e( 'Glyph', 'peptide-starter' ); ?>
</label>
<select id="signal_row_<?php echo esc_attr( $i ); ?>_glyph"
name="signal_row_<?php echo esc_attr( $i ); ?>_glyph"
style="width:100%;padding:6px;font-size:16px;">
<option value="" <?php selected( $row_glyph, '' ); ?>>—</option>
<?php foreach ( $allowed_glyphs as $g ) : ?>
<option value="<?php echo esc_attr( $g ); ?>" <?php selected( $row_glyph, $g ); ?>>
<?php echo esc_html( $g ); ?>
</option>
<?php endforeach; ?>
</select>
</div>
<div style="flex:1;">
<label for="signal_row_<?php echo esc_attr( $i ); ?>"
style="display:block;margin-bottom:4px;font-size:12px;color:#444;">
<?php
/* translators: %d is the row number */
echo esc_html( sprintf( __( 'Row %d label', 'peptide-starter' ), $i ) );
?>
</label>
<input type="text" id="signal_row_<?php echo esc_attr( $i ); ?>"
name="signal_row_<?php echo esc_attr( $i ); ?>"
value="<?php echo esc_attr( $row_text ); ?>"
style="width:100%;padding:8px;font-size:14px;"
placeholder="<?php esc_attr_e( 'Evidence signal label', 'peptide-starter' ); ?>">
</div>
</div>
<?php endfor; ?>
<hr style="border:none;border-top:1px solid #ddd;margin:8px 0 16px;">
<label style="display:flex;align-items:center;gap:8px;cursor:pointer;">
<input type="checkbox" name="has_partner_link" value="1"
<?php checked( $has_partner, true ); ?> style="width:16px;height:16px;">
<span>
<strong><?php esc_html_e( 'Has active partner link', 'peptide-starter' ); ?></strong>
<span style="display:block;font-size:12px;color:#666;margin-top:2px;">
<?php esc_html_e( 'Check this when the monograph contains an affiliate partner link. Controls the inline disclosure strip.', 'peptide-starter' ); ?>
</span>
</span>
</label>
<label style="display: block; margin-bottom: 4px;">
<strong><?php esc_html_e( 'Signal Row 3', 'peptide-starter' ); ?></strong>
</label>
<input type="text" name="signal_row_3" value="<?php echo esc_attr( $signal_row_3 ); ?>" placeholder="<?php esc_attr_e( 'e.g., Regulatory status varies', 'peptide-starter' ); ?>" style="width: 100%; padding: 8px; font-size: 14px;">
</div>
</div>
<?php
}
@@ -137,21 +232,23 @@ function peptide_starter_render_verdict_meta_box( $post ) {
*/
function peptide_starter_save_verdict_meta( $post_id, $post ) {
// Verify nonce.
if ( ! isset( $_POST['peptide_starter_verdict_nonce'] ) || ! wp_verify_nonce( sanitize_key( $_POST['peptide_starter_verdict_nonce'] ), 'peptide_starter_verdict_nonce' ) ) {
if ( ! isset( $_POST['peptide_starter_verdict_nonce'] )
|| ! wp_verify_nonce( sanitize_key( $_POST['peptide_starter_verdict_nonce'] ), 'peptide_starter_verdict_nonce' )
) {
return;
}
// Only run for pr_peptide CPT.
if ( 'pr_peptide' !== $post->post_type ) {
// Only run for peptide CPT.
if ( 'peptide' !== $post->post_type ) {
return;
}
// Allow only editors and admins.
if ( ! current_user_can( 'edit_post', $post_id ) ) {
return;
}
$allowed_states = array( 'established', 'promising', 'investigational', 'insufficient', 'cautionary' );
$allowed_glyphs = array( '✓', '!', '?', '⊘', '⚠' );
// Save verdict_state.
if ( isset( $_POST['verdict_state'] ) ) {
@@ -163,7 +260,17 @@ function peptide_starter_save_verdict_meta( $post_id, $post ) {
}
}
// Save signal rows.
// Save verdict_text.
if ( isset( $_POST['verdict_text'] ) ) {
$text = sanitize_textarea_field( wp_unslash( $_POST['verdict_text'] ) );
if ( ! empty( $text ) ) {
update_post_meta( $post_id, 'verdict_text', $text );
} else {
delete_post_meta( $post_id, 'verdict_text' );
}
}
// Save signal rows and their per-row glyphs.
for ( $i = 1; $i <= 3; $i++ ) {
$field_name = 'signal_row_' . $i;
if ( isset( $_POST[ $field_name ] ) ) {
@@ -174,6 +281,20 @@ function peptide_starter_save_verdict_meta( $post_id, $post ) {
delete_post_meta( $post_id, $field_name );
}
}
$glyph_field = 'signal_row_' . $i . '_glyph';
if ( isset( $_POST[ $glyph_field ] ) ) {
$glyph = wp_unslash( $_POST[ $glyph_field ] );
if ( in_array( $glyph, $allowed_glyphs, true ) ) {
update_post_meta( $post_id, $glyph_field, $glyph );
} else {
delete_post_meta( $post_id, $glyph_field );
}
}
}
// Save has_partner_link (checkbox — present = true, absent = false).
$has_partner = isset( $_POST['has_partner_link'] ) && '1' === $_POST['has_partner_link'];
update_post_meta( $post_id, 'has_partner_link', $has_partner ? '1' : '0' );
}
add_action( 'save_post', 'peptide_starter_save_verdict_meta', 10, 2 );

View File

@@ -42,4 +42,5 @@ get_header();
</div>
</main>
<?php get_footer();
<?php
get_footer();

View File

@@ -33,8 +33,8 @@ get_header();
<section class="ps-tool-page">
<div class="ps-container">
<?php
if ( shortcode_exists( 'peptide_tools_calculator' ) ) {
echo do_shortcode( '[peptide_tools_calculator]' );
if ( shortcode_exists( 'prc_calculator' ) ) {
echo do_shortcode( '[prc_calculator]' );
} else {
?>
<div class="ps-tool-fallback">

View File

@@ -41,4 +41,5 @@ get_header();
</div>
</main>
<?php get_footer();
<?php
get_footer();

46
page-our-methodology.php Normal file
View File

@@ -0,0 +1,46 @@
<?php
/**
* Template Name: Our Methodology
*
* Two-column layout with sticky sidebar ToC for the editorial methodology page.
* Mirrors page-how-we-review.php layout; CSS classes use page-our-methodology prefix.
*
* @package peptide-starter
*/
get_header();
?>
<main id="main" class="site-main">
<div class="page-our-methodology">
<div class="page-our-methodology__content">
<?php
while ( have_posts() ) {
the_post();
?>
<article id="post-<?php the_ID(); ?>" <?php post_class(); ?>>
<header class="entry-header">
<h1 class="entry-title"><?php the_title(); ?></h1>
</header>
<div class="entry-content">
<?php the_content(); ?>
</div>
</article>
<?php
}
?>
</div>
<?php if ( ! empty( get_the_content() ) ) : ?>
<aside class="page-our-methodology__sidebar">
<nav class="page-toc" aria-label="<?php esc_attr_e( 'Page contents', 'peptide-starter' ); ?>">
<h3><?php esc_html_e( 'Contents', 'peptide-starter' ); ?></h3>
<!-- JavaScript-generated ToC will be inserted here -->
</nav>
</aside>
<?php endif; ?>
</div>
</main>
<?php
get_footer();

44
page-subscribe.php Executable file
View File

@@ -0,0 +1,44 @@
<?php
/**
* Template Name: Subscribe
*
* Single-column, signup-form-centric layout for the /subscribe/ landing page.
* Lighter than the methodology / how-we-review templates — no sticky two-column ToC.
* This is a conversion page, not a reference page.
*
* Who calls it: WordPress page loader when page_template meta = page-subscribe.php
* Dependencies: Beehiiv embed script (loaded inline below); attribution.js loaded
* site-wide via peptide_starter_enqueue_beehiiv_attribution() in functions.php
*
* @see footer.php — newsletter CTA in footer column 1
* @see single-peptide.php — compact inline form on monograph pages
* @package peptide-starter
*/
get_header();
?>
<main id="main" class="site-main">
<div class="page-subscribe">
<div class="page-subscribe__content">
<?php
while ( have_posts() ) {
the_post();
?>
<article id="post-<?php the_ID(); ?>" <?php post_class(); ?>>
<header class="entry-header">
<h1 class="entry-title"><?php the_title(); ?></h1>
</header>
<div class="entry-content">
<?php the_content(); ?>
</div>
</article>
<?php
}
?>
</div>
</div>
</main>
<?php
get_footer();

View File

@@ -139,6 +139,25 @@ get_header();
?>
</article>
<!-- Newsletter Signup — compact inline form below monograph content -->
<div class="peptide-newsletter-cta" style="margin-top: var(--spacing-3xl); padding: var(--spacing-2xl); background: var(--color-surface-subtle, #f8f8f6); border-radius: 8px; border: 1px solid var(--color-border-default);">
<p style="margin: 0 0 var(--spacing-md); font-size: 0.95rem; color: var(--color-text-secondary);">
<?php esc_html_e( 'Want updates on monographs like this? One email a week, no spam.', 'peptide-starter' ); ?>
</p>
<div class="beehiiv-embed-wrap" style="max-width: 100%; overflow: hidden;">
<script async src="https://subscribe-forms.beehiiv.com/embed.js"></script>
<iframe
src="https://subscribe-forms.beehiiv.com/6edcd482-cbea-4767-8777-97ac17d6d609"
class="beehiiv-embed"
data-test-id="beehiiv-embed"
frameborder="0"
scrolling="no"
style="width: 100%; max-width: 100%; height: 180px; margin: 0; border-radius: 4px; background-color: transparent; box-shadow: 0 0 #0000;"
title="<?php esc_attr_e( 'Subscribe to Repo Weekly', 'peptide-starter' ); ?>"
> </iframe>
</div>
</div>
<!-- Navigation -->
<nav class="post-navigation" style="margin-top: var(--spacing-3xl); padding-top: var(--spacing-2xl); border-top: 1px solid var(--color-border-default);">
<div style="display: flex; justify-content: space-between; gap: var(--spacing-lg);">

6630
style.css

File diff suppressed because it is too large Load Diff

View File

@@ -2,8 +2,10 @@
/**
* Template Part: Research Module Cards
*
* Renders a 6-card grid of research modules (tools/sections) for the front page.
* Renders a 5-card grid of research modules (tools/sections) for the front page.
* Each card checks if the target plugin is active; inactive cards are dimmed.
* Cards with 'coming_soon' => true display a "Coming soon" badge overlaid in
* the top-right corner — layered on top of the --inactive visual treatment.
*
* @see front-page.php — includes this template part
* @see style.css — .ps-module-* classes
@@ -21,48 +23,48 @@ if ( ! defined( 'ABSPATH' ) ) {
}
// Module card definitions with shortcode checks for graceful degradation.
// 'coming_soon' => true adds a "Coming soon" badge without removing existing
// --inactive styling — the badge layers on top of the dim/no-hover treatment.
$modules = array(
array(
'title' => __( 'Peptides', 'peptide-starter' ),
'description' => __( 'Browse the complete reagent directory with protocols and research parameters.', 'peptide-starter' ),
'description' => __( 'Read the verdicts. 20 monographs across 5 evidence states, growing weekly.', 'peptide-starter' ),
'url' => '/peptides',
'icon' => '<svg width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><path d="M12 2L12 22"/><path d="M5 12C5 8.13 8.13 5 12 5s7 3.13 7 7-3.13 7-7 7-7-3.13-7-7z"/><circle cx="12" cy="8" r="1.5" fill="currentColor" stroke="none"/><circle cx="12" cy="16" r="1.5" fill="currentColor" stroke="none"/></svg>',
'available' => shortcode_exists( 'peptide_directory' ) || post_type_exists( 'peptide' ),
'coming_soon' => false,
),
array(
'title' => __( 'Calculator', 'peptide-starter' ),
'description' => __( 'Precision reconstitution calculator for accurate laboratory preparations.', 'peptide-starter' ),
'description' => __( 'Reconstitute a peptide accurately. Enter the vial, the bacteriostatic water, the target dose; get the units.', 'peptide-starter' ),
'url' => '/calculator',
'icon' => '<svg width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><rect x="4" y="2" width="16" height="20" rx="2"/><line x1="8" y1="6" x2="16" y2="6"/><line x1="8" y1="10" x2="10" y2="10"/><line x1="14" y1="10" x2="16" y2="10"/><line x1="8" y1="14" x2="10" y2="14"/><line x1="14" y1="14" x2="16" y2="14"/><line x1="8" y1="18" x2="16" y2="18"/></svg>',
'available' => shortcode_exists( 'peptide_tools_calculator' ),
'available' => shortcode_exists( 'prc_calculator' ),
'coming_soon' => false,
),
array(
'title' => __( 'Protocol Builder', 'peptide-starter' ),
'description' => __( 'Interactive multi-step wizard for designing research protocols.', 'peptide-starter' ),
'description' => __( 'Build a protocol you can hand to anyone. Doses, schedule, notes, reviewable history.', 'peptide-starter' ),
'url' => '/protocol-builder',
'icon' => '<svg width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><path d="M9 5H7a2 2 0 00-2 2v12a2 2 0 002 2h10a2 2 0 002-2V7a2 2 0 00-2-2h-2"/><rect x="9" y="3" width="6" height="4" rx="1"/><path d="M9 14l2 2 4-4"/></svg>',
'available' => shortcode_exists( 'peptide_tools_protocol_builder' ),
'coming_soon' => true,
),
array(
'title' => __( 'Tracker', 'peptide-starter' ),
'description' => __( 'Log doses, manage active compounds, and forecast vial depletion timelines.', 'peptide-starter' ),
'description' => __( 'Log doses and timing. For people running their own protocols, and people supervising someone else\'s.', 'peptide-starter' ),
'url' => '/tracker',
'icon' => '<svg width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><line x1="18" y1="20" x2="18" y2="10"/><line x1="12" y1="20" x2="12" y2="4"/><line x1="6" y1="20" x2="6" y2="14"/><line x1="3" y1="20" x2="21" y2="20"/></svg>',
'available' => shortcode_exists( 'peptide_tracker' ),
),
array(
'title' => __( 'Science Feed', 'peptide-starter' ),
'description' => __( 'Latest research publications, clinical studies, and laboratory insights.', 'peptide-starter' ),
'url' => '/news',
'icon' => '<svg width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><path d="M4 22h16a2 2 0 002-2V4a2 2 0 00-2-2H8a2 2 0 00-2 2v16a2 2 0 01-2 2zm0 0a2 2 0 01-2-2v-9c0-1.1.9-2 2-2h2"/><line x1="10" y1="6" x2="18" y2="6"/><line x1="10" y1="10" x2="18" y2="10"/><line x1="10" y1="14" x2="14" y2="14"/></svg>',
'available' => shortcode_exists( 'peptide_news' ),
'coming_soon' => true,
),
array(
'title' => __( 'Subject Log', 'peptide-starter' ),
'description' => __( 'Longitudinal tracking for biomarker data and protocol history.', 'peptide-starter' ),
'description' => __( 'Track outcomes over time. Subjective markers, lab results, protocol changes — your own data, kept private.', 'peptide-starter' ),
'url' => '/subject-log',
'icon' => '<svg width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"><path d="M20 21v-2a4 4 0 00-4-4H8a4 4 0 00-4 4v2"/><circle cx="12" cy="7" r="4"/></svg>',
'available' => shortcode_exists( 'peptide_tracker_subject_log' ),
'coming_soon' => true,
),
);
?>
@@ -70,9 +72,9 @@ $modules = array(
<section class="ps-modules-section">
<div class="ps-container-wide">
<div class="ps-modules-header">
<h2 class="ps-modules-title"><?php esc_html_e( 'Research Modules', 'peptide-starter' ); ?></h2>
<h2 class="ps-modules-title"><?php esc_html_e( 'Tools', 'peptide-starter' ); ?></h2>
<p class="ps-modules-subtitle">
<?php esc_html_e( 'Tools and resources for laboratory research and data management.', 'peptide-starter' ); ?>
<?php esc_html_e( 'Free to use. Built for people running their own protocols, and people deciding whether they should.', 'peptide-starter' ); ?>
</p>
</div>
@@ -80,6 +82,9 @@ $modules = array(
<?php foreach ( $modules as $module ) : ?>
<a href="<?php echo esc_url( home_url( $module['url'] ) ); ?>"
class="ps-module-card <?php echo $module['available'] ? '' : 'ps-module-card--inactive'; ?>">
<?php if ( ! empty( $module['coming_soon'] ) ) : ?>
<span class="ps-module-card__badge"><?php esc_html_e( 'Coming soon', 'peptide-starter' ); ?></span>
<?php endif; ?>
<div class="ps-module-card__icon">
<?php
// SVG icons are defined in this template — safe to output directly.
@@ -96,3 +101,4 @@ $modules = array(
</div>
</div>
</section>

View File

@@ -17,11 +17,26 @@ $show_label = isset( $args['show_label'] ) ? (bool) $args['show_label'] : tru
// State configuration.
$states = array(
'established' => array( 'glyph' => '✓', 'label' => 'Established' ),
'promising' => array( 'glyph' => '◐', 'label' => 'Promising' ),
'investigational' => array( 'glyph' => '?', 'label' => 'Investigational' ),
'insufficient' => array( 'glyph' => '⊘', 'label' => 'Insufficient Evidence' ),
'cautionary' => array( 'glyph' => '⚠', 'label' => 'Cautionary' ),
'established' => array(
'glyph' => '✓',
'label' => 'Established',
),
'promising' => array(
'glyph' => '◐',
'label' => 'Promising',
),
'investigational' => array(
'glyph' => '?',
'label' => 'Investigational',
),
'insufficient' => array(
'glyph' => '⊘',
'label' => 'Insufficient Evidence',
),
'cautionary' => array(
'glyph' => '⚠',
'label' => 'Cautionary',
),
);
// Early exit if invalid state.

View File

@@ -2,10 +2,17 @@
/**
* Verdict Card Component (Monograph Hero)
*
* Displays a full verdict card for a pr_peptide post.
* Reads verdict_state and signal_row_1/2/3 from post meta.
* Accepts $args['post_id'].
* Displays the full verdict card hero for a peptide post.
* Reads verdict_state, verdict_text, signal_row_1/2/3, and
* signal_row_1/2/3_glyph from post meta.
*
* Who calls it: single-peptide.php for posts with a verdict_state.
* Depends on: inc/verdict-meta.php (meta registration),
* template-parts/verdict/badge.php,
* template-parts/verdict/evidence-row.php.
*
* @see inc/verdict-meta.php
* @see single-peptide.php
* @package peptide-starter
*/
@@ -15,27 +22,32 @@ if ( ! defined( 'ABSPATH' ) ) {
$post_id = isset( $args['post_id'] ) ? absint( $args['post_id'] ) : get_the_ID();
// Get verdict state from post meta.
// Get verdict state; bail early if unset.
$verdict_state = get_post_meta( $post_id, 'verdict_state', true );
// Early exit if no verdict state is set.
if ( empty( $verdict_state ) ) {
return;
}
// Collect signal rows.
// Get opinionated verdict text; fall back to placeholder if not yet authored.
$verdict_text = get_post_meta( $post_id, 'verdict_text', true );
if ( empty( $verdict_text ) ) {
$verdict_text = __( 'This peptide merits careful scientific review. Please consult with a healthcare provider before use.', 'peptide-starter' );
}
// Collect signal rows with their per-row glyphs.
// Glyph comes from the signal_row_N_glyph meta field; if unset, no glyph is
// rendered. This is intentional — a missing glyph is better than a wrong one.
$signals = array();
for ( $i = 1; $i <= 3; $i++ ) {
$signal_text = get_post_meta( $post_id, 'signal_row_' . $i, true );
$signal_text = get_post_meta( $post_id, 'signal_row_' . $i, true );
$signal_glyph = get_post_meta( $post_id, 'signal_row_' . $i . '_glyph', true );
if ( ! empty( $signal_text ) ) {
$signals[] = array(
'glyph' => $i === 1 ? '✓' : ( $i === 2 ? '!' : '?' ),
'glyph' => $signal_glyph, // May be empty string; evidence-row handles that.
'label' => $signal_text,
);
}
}
$post = get_post( $post_id );
?>
<div class="pr-verdict-card">
<div class="pr-verdict-card__header">
@@ -51,16 +63,13 @@ $post = get_post( $post_id );
);
?>
</div>
<time class="pr-verdict-card__updated" datetime="<?php echo esc_attr( get_the_date( 'c', $post_id ) ); ?>">
<?php echo esc_html( 'Updated ' . get_the_date( 'M d, Y', $post_id ) ); ?>
</time>
<!-- last_reviewed_date timestamp deferred to v1.1 — WP post date != editorial review date -->
</div>
<h1 class="pr-verdict-card__title"><?php echo esc_html( get_the_title( $post_id ) ); ?></h1>
<p class="pr-verdict-card__summary">
<?php
// Get post excerpt or first 100 chars of content.
$summary = get_the_excerpt( $post_id );
if ( empty( $summary ) ) {
$content = get_the_content( null, false, $post_id );
@@ -82,10 +91,7 @@ $post = get_post( $post_id );
<div class="pr-verdict-card__verdict-label"><?php esc_html_e( 'Our verdict:', 'peptide-starter' ); ?></div>
<div class="pr-verdict-card__verdict-text">
<?php
// Placeholder verdict text; can be extended with a custom meta field.
echo esc_html__( 'This peptide merits careful scientific review. Please consult with a healthcare provider before use.', 'peptide-starter' );
?>
<?php echo wp_kses_post( nl2br( $verdict_text ) ); ?>
</div>
<div class="pr-verdict-card__cta-group">